Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe15g00473 | ATGGCTCTGCACCCAAATAAACACAGAATCAAACTCCACCATAGCTCGCTCTTCTTCCTGGACTTCCTTTACTGCACTGAAGAACAACAGCTTGAAACAGAGGATAACAATGGCGGCGGCTCCAACGACTTCCCTCTTTGGGAAGAGACGACCCATTTCCTTGCTTGTGAAGACGAGGAGCTCGATCGTTTGCTGTCCAAAGAACAGGACCAGAATCTTCAATACGGTGCTGTTCTGGAGGACTTGGTTAAAACAGGGGGTGCTCTGTTTTTGGCTAGAACAGAGGCCGTCGAATGGTTGCTTAAAGTTAATGCCTTTTATGGCTTCTCCTCTCTCACAGCTCTCTTAGCCATTAATTACCTCGACAGAGTCCTCACCGGCCGCCATTTTCAAAGAGATAAGCCATGGATGCTTCAGCTTCTTGCCGTAACTTGCATTTCTTTAGCTGCCAAAGTCGAAGAAGTTCGTGTCCCTGTTCTTCAAGATCTCCAGGTGGAAGATTCAAAGTTCATTTTCGAAGCAAAAACGATACAGAGAATGGAGCTTTTAGTGCTCAGTGCTCTTCAATGGAAGATGCACGCAGTGACCCCTGTTTCATTTCTTGGCATTATAACAAAAGGGCTTGGATTAAAGAAGAATCAGTACTTTCAGAAAGAGTTTCTGAGACGCTTTGAGCGTATTCTTCTCTCTCTCGTCACTGATTCAAGATCGGTGGGGTTTCTTCCTTCTGTAATGGCGGTATCAGCAATGGTGAGCGTTGTTGAAGAGATGGGGAGCTGTAAGCCATTGGAGGAGTTGCAGGATCAGATTCTTAATGCCCTCAAAATAAACAAGGGAAGAGTGAAGGAGTGCTGCAAGGTGATAATGGAGGTATCAAAAGGGCAGGCGAAAGCAAAGGTATCAGGGAAGAGGAAGCATGTGGAGGAGGAGGAGGAAGCAGAAGCAGAAGCAGAAGCAGAATCAGAAGGTGAAGCAGGGAGCCCAAATGGAGTAATAGAGGCCAATTTCAGCTGTGGAAGCTCCAACCATTCGTGGGGCATGGGGTCGCCTCTGTCACCACACACGCCTTCTTCTTCCAAAAGAATCACACCCACTCCATGA | 1101 | 47.05 | MALHPNKHRIKLHHSSLFFLDFLYCTEEQQLETEDNNGGGSNDFPLWEETTHFLACEDEELDRLLSKEQDQNLQYGAVLEDLVKTGGALFLARTEAVEWLLKVNAFYGFSSLTALLAINYLDRVLTGRHFQRDKPWMLQLLAVTCISLAAKVEEVRVPVLQDLQVEDSKFIFEAKTIQRMELLVLSALQWKMHAVTPVSFLGIITKGLGLKKNQYFQKEFLRRFERILLSLVTDSRSVGFLPSVMAVSAMVSVVEEMGSCKPLEELQDQILNALKINKGRVKECCKVIMEVSKGQAKAKVSGKRKHVEEEEEAEAEAEAESEGEAGSPNGVIEANFSCGSSNHSWGMGSPLSPHTPSSSKRITPTP | 366 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 5737985 | 5740755 | - | Cp4.1LG15g04710.1 | Cpe15g00473 | 481931 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe15g00473 | 366 | MobiDBLite | consensus disorder prediction | 333 | 366 | - | - | |
| Cpe15g00473 | 366 | SMART | cyclin_7 | 98 | 186 | IPR013763 | - | |
| Cpe15g00473 | 366 | MobiDBLite | consensus disorder prediction | 298 | 366 | - | - | |
| Cpe15g00473 | 366 | Gene3D | - | 194 | 286 | - | - | |
| Cpe15g00473 | 366 | SUPERFAMILY | Cyclin-like | 54 | 193 | IPR036915 | - | |
| Cpe15g00473 | 366 | ProSitePatterns | Cyclins signature. | 93 | 124 | IPR006671 | - | |
| Cpe15g00473 | 366 | CDD | CYCLIN | 93 | 185 | IPR013763 | - | |
| Cpe15g00473 | 366 | PANTHER | CYCLINS | 36 | 343 | IPR039361 | - | |
| Cpe15g00473 | 366 | Pfam | Cyclin, N-terminal domain | 92 | 192 | IPR006671 | - | |
| Cpe15g00473 | 366 | PANTHER | CYCLIN-D3-1 | 36 | 343 | - | - | |
| Cpe15g00473 | 366 | SMART | Cyclin_C_2 | 195 | 313 | IPR004367 | - | |
| Cpe15g00473 | 366 | Pfam | Cyclin, C-terminal domain | 195 | 310 | IPR004367 | - | |
| Cpe15g00473 | 366 | Coils | Coil | 300 | 320 | - | - | |
| Cpe15g00473 | 366 | Gene3D | - | 92 | 193 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe01g00427 | Cpe15g00473 | CCT | |
| Cpe14g00286 | Cpe15g00473 | CCT | |
| Cpe14g00286 | Cpe15g00473 | ECH | |
| Cpe01g00427 | Cpe15g00473 | ECH | |
| Cpe04g00298 | Cpe15g00473 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe02g00219 | Cpe-Chr2:1126148 | Cpe15g00473 | Cpe-Chr15:5737985 | 1.94E-23 | dispersed | |
| Cpe14g00286 | Cpe-Chr14:1670885 | Cpe15g00473 | Cpe-Chr15:5737985 | 8.86E-89 | dispersed | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe10g00541 | Cpe-Chr10:3185468 | 2.14E-46 | dispersed | |
| Cpe01g00427 | Cpe-Chr1:2468894 | Cpe15g00473 | Cpe-Chr15:5737985 | 1.08E-88 | wgd | |
| Cpe11g00137 | Cpe-Chr11:738016 | Cpe15g00473 | Cpe-Chr15:5737985 | 1.49E-80 | wgd | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe19g00642 | Cpe-Chr19:5181481 | 1.43E-78 | wgd | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe02g00199 | Cpe-Chr2:1031220 | 3.18E-46 | wgd | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe04g00298 | Cpe-Chr4:3757790 | 4.74E-147 | wgd | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe06g00180 | Cpe-Chr6:976067 | 2.93E-72 | wgd | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe07g00498 | Cpe-Chr7:3257734 | 9.77E-68 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe15g00473 | K14505 | - | csv:101222066 | 463.766 |