Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00475 ATGGATCCAAATTCTACTGATTCCCCAACATCACCTACTGTTAGTTCCTTGGAAACTAAACCACCAGAAGCACAGCCTCAGGCTTCTGCTACCATTGGAATGAATAATGTAGCCCCTGATTCACCATCGAAGCGATCTCCCAGTGGCATAACTTCATGGACCAAAAGCTTGAGAATTACTCAATCACAGTCAGCTTCACAAGATGGCACGTCTGAGAATGCTGAGAAGTCAGCATTTGCACGTTTTACTAGTGGTTTAGGTTTGAATTTGTCTCCGAAATCCGCTACACCTAATGATTCCTCTGATGGAACCTCTAAACCTGCCCAACCCGGTTTTGTGGGATCAATTACAAGAGGGTTGGTTGATTCTTCTAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCACGTTGTCTCCCAAAATAAGCGACGATACCAGGAAGGTGGATTTGACTTGGATATGACTTATATTACTGAAAACATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTCGGATATGTTGAGGGTTTCTACAGGAATCATATGGAAGAAGTCATCAAGTTCTTCGAAACACATCACAAGGGAAAATACAAAGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCAGTTCAACTCATAATATCATTTTGCCGAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACCGGCTTGATGATTTCCAGTCTTCTTCTGTTTCTGAAGTTCTTTCCCACTGCTGACGAATCCATCGAATACTACAACCAGAGAAGGTGTTTCGATGGCAAGGGCCTGGTTTTACCAAGTCAGATTAGGTACGTCAAGTATTTCGAGTGTATTTTAACACACTTCAATGGAGAAAATCCTCCCAACCGCAGGTGCGTGCTTAGAGGGTTTCGTCTCCACCGATGCCCATATTGGATCAGGCCTTCCATTACGGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAATGCATCCAAGAATCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGGTAATGGTTTTCGCCTTGCCAGGGGAGCCTGGTCTAGCTGAGTTGTGTGGGGACTTCAAGGTGGAGGTTGTTCTAGTAGATACCTCGCCGAACAAGGACAATACTACCAAGAAGTTGGATGAAGGCTCAGGGTCAAAACCTTCTACAGTTCATGAGAGTGAAGTTTCTGAGAACCAAAACAGAAAACCAGGAACTAATGATAAAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGGAGGCAACTGCAGGATCAGCTATCAAGACGACATCCAAATCTCAAACGACTGCGACTTCATCAGACGACGTTGCAAGTTCATCACATGCAACGAAGCAAGCTTCCCTGAGAGATGGTAGAGCGAAACAGACTGCTCTCACAGAAGTTCCGAACTCGGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTCGGCGATGACGACGAGGAGATTGAG 1584 44.44 MDPNSTDSPTSPTVSSLETKPPEAQPQASATIGMNNVAPDSPSKRSPSGITSWTKSLRITQSQSASQDGTSENAEKSAFARFTSGLGLNLSPKSATPNDSSDGTSKPAQPGFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVACFPFDDHNCPPVQLIISFCRSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTADESIEYYNQRRCFDGKGLVLPSQIRYVKYFECILTHFNGENPPNRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKMHPRIKSLSPEDFWFTAPKKGVMVFALPGEPGLAELCGDFKVEVVLVDTSPNKDNTTKKLDEGSGSKPSTVHESEVSENQNRKPGTNDKDDVFSDSESEGGSSKSKEATAGSAIKTTSKSQTTATSSDDVASSSHATKQASLRDGRAKQTALTEVPNSESEFKAMAADASVFTFGDDDEEIE 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5747188 5753065 - Cp4.1LG15g04760.1 Cpe15g00475 481933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00475 528 MobiDBLite consensus disorder prediction 422 448 - -
Cpe15g00475 528 CDD PTP_PTEN 154 299 IPR045101 GO:0016791
Cpe15g00475 528 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 386 525 - -
Cpe15g00475 528 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 15 389 - -
Cpe15g00475 528 MobiDBLite consensus disorder prediction 1 75 - -
Cpe15g00475 528 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 302 IPR029021 -
Cpe15g00475 528 ProSiteProfiles C2 tensin-type domain profile. 312 459 IPR014020 -
Cpe15g00475 528 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 219 279 IPR000387 GO:0016311|GO:0016791
Cpe15g00475 528 MobiDBLite consensus disorder prediction 87 111 - -
Cpe15g00475 528 MobiDBLite consensus disorder prediction 87 116 - -
Cpe15g00475 528 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 386 525 - -
Cpe15g00475 528 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 15 389 - -
Cpe15g00475 528 SMART PTEN_C2_2 310 499 IPR014020 -
Cpe15g00475 528 ProSiteProfiles Phosphatase tensin-type domain profile. 144 305 IPR029023 -
Cpe15g00475 528 ProSitePatterns Tyrosine specific protein phosphatases active site. 242 252 IPR016130 GO:0016311|GO:0016791
Cpe15g00475 528 MobiDBLite consensus disorder prediction 400 414 - -
Cpe15g00475 528 Gene3D Protein tyrosine phosphatase superfamily 129 308 IPR029021 -
Cpe15g00475 528 MobiDBLite consensus disorder prediction 397 505 - -
Cpe15g00475 528 MobiDBLite consensus disorder prediction 449 503 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00296 Cpe15g00475 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00475 Cpe-Chr15:5747188 Cpe19g00640 Cpe-Chr19:5169575 0 wgd
Cpe15g00475 Cpe-Chr15:5747188 Cpe04g00296 Cpe-Chr4:3737062 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00475 K01110 - csv:101222304 854.358