Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00486 ATGGGTATGTTTTCAAAGCCAAAAATCTTTAGAACAGGAACGACCCATAATGATTCGATGGGTTTTAATGGGGTTTCTCCAGCAAGCAAGTGGAAATGGACCCATTTCTTGCCTCTGTTTGTAGCGATGGTGGTCATAGCAGAGATCGCTTCTCTAAGTCGGCTCGATATCGCGAAAAATGCGGCTATGGTGGACTCTTGGGTCGACTTATTCTATGGACCTCCGCCTTTGCAAGAAGAAATCGAAGATGTTAGCACTGGAATCACAATTGATGGAGTAATGGGTAGAGTTAACTGTGAGGAGTGGCTGGAGAAGGTGGATGCGGTGGAGTACTCTAGGGACTTCAAAAGGAAACCTGTTTTGGTTTCTGGGTCCGAGAAGGATTGGAAAACTTGTGATGTGGGATGCCAGTTTGGATTGAATCCTGGTGAGCAGCCTGATGCTGCATTGGGATCACCTCAACAAGGTCGAGTTGCTAGCGTCCTTCGGTCGATGGAATCGTCGCATTACTATCCAGAGAACAATATTGATTTGGCAAGACGGAAGGGTTACACTGTGGTTATGACCACTAGTCTTTCATCAGATGTTCCTGTTGGATATTTTTCGTGGGCAGAATACGACATAATGGCACCAGTGCAACCAAAGACCGAGCCTGCCCTTGCAGCTGCCTTCATTTCGAATTGTGGCGCGCGCAACTTTCGTTTGCAAGCTCTTGAAGCACTTGAGAAATTGGATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCGCGATGGAAGAGTTGACAAAGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTCGAGAATTCCAATGAGGAAGATTATGTCACAGAAAAGTTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGTACTCCAAATATCAAGGAGTTTGCTCCTTCTCCTGATTCATATTTGCATATCAAGGAAATTTCCGATGTCGAGTCGGTTGCCAAGTCCATGAAATACCTCGCAGAGAATCCCAAAATGTACAATCAATCACTAAGATGGAAGCACGATGGTCCATCCGATTCGTTCAAGGCCCTTGTCGATATGGCAGCAGTACACTCATCGTGTCGCCTTTGCATCCACTTAGCAACCATCATCCACGAGAAAGAAGAAACCAGTCCCGAGTTCAAGAAACGACCGTGCAAGTGCTCTCGTGGCTCCGAAACGGTGTATCATTTATACGTAAGGGAGAGAGGGCGGTTCGAAATGCAATCCATTTTCTTGAGGTCGGGAAATTTAACGTTGGAGGCTTTAGAATCGAGAGTACTCGAAAAGTTCAAGTCTTTGAAACATGTCCCAATTTGGAAGCAAGAACGGCCTGAAAGCTTAAGAGGAGGAGATAAACTTAAGCTATATAGGATATATCCTGTTGGGTTGACACAGAAGCAGGCTTTATATACCTTCAGATTCAAAGGTAATGATGATTTCAAAACTCACATAGAAACACACCCTTGTGCTAAGATGGAAATCATATTTGTCTGA 1530 44.58 MGMFSKPKIFRTGTTHNDSMGFNGVSPASKWKWTHFLPLFVAMVVIAEIASLSRLDIAKNAAMVDSWVDLFYGPPPLQEEIEDVSTGITIDGVMGRVNCEEWLEKVDAVEYSRDFKRKPVLVSGSEKDWKTCDVGCQFGLNPGEQPDAALGSPQQGRVASVLRSMESSHYYPENNIDLARRKGYTVVMTTSLSSDVPVGYFSWAEYDIMAPVQPKTEPALAAAFISNCGARNFRLQALEALEKLDVKIDSYGSCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGTPNIKEFAPSPDSYLHIKEISDVESVAKSMKYLAENPKMYNQSLRWKHDGPSDSFKALVDMAAVHSSCRLCIHLATIIHEKEETSPEFKKRPCKCSRGSETVYHLYVRERGRFEMQSIFLRSGNLTLEALESRVLEKFKSLKHVPIWKQERPESLRGGDKLKLYRIYPVGLTQKQALYTFRFKGNDDFKTHIETHPCAKMEIIFV 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5844027 5850343 + Cp4.1LG15g04780.1 Cpe15g00486 481944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00486 509 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 381 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cpe15g00486 509 Gene3D - 165 358 IPR038577 -
Cpe15g00486 509 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 384 - -
Cpe15g00486 509 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 486 - -
Cpe15g00486 509 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 486 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00439 Cpe15g00486 CCT
Cpe14g00294 Cpe15g00486 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00293 Cpe-Chr14:1719598 Cpe15g00486 Cpe-Chr15:5844027 0 dispersed
Cpe14g00294 Cpe-Chr14:1726751 Cpe15g00486 Cpe-Chr15:5844027 3.81E-46 dispersed
Cpe01g00439 Cpe-Chr1:2526392 Cpe15g00486 Cpe-Chr15:5844027 1.36E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00486 K00753 - csv:101205170 912.909