Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00488 ATGGCATCCACCAACAACGAACAAGAAAACCAGAACCAAGCCGGAAGGCACCAGGAAGTCGGCCACAAGAGCCTCTTGCAGAGCGATGCTCTGTATCAGTACATTCTTGAGACGAGCGTTTATCCAAGAGAGCCTGAATCGATGAAGGAATTGAGAGAATTGACTGCCAAACATCCATGGAACATCATGACTACATCGGCGGACGAAGGACAGTTCTTAAACATGCTTTTGAAACTAATTAATGCGAAGAAAACGATGGAGATTGGAGTATACACTGGCTACTCTCTTCTCGCAACAGCCCTAGCACTTCCGGAAGACGGACAGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTCGGTTTACCGGTGATTGAGAAAGCCGGCGTTGCTCACAAGATCGAGTTCAAGGAAGGCCCCGCTCTCCCTGTTCTTGACGAGATGGTGGCTGATGAGAAAAATCATGGAAGCTACGACTTCATCTTTGTGGACGCTGATAAAGATAACTACATAAACTATCATAAGAGATTGATCGATTTAGTGAAAGTTGGAGGATTGATCGGGTACGACAACACACTATGGAACGGATCAGTGGTTGCTCCACCCGACGCCCCATTGCGCAAGTATGTTAGGTACTACAGGGACTTTGTGTTGGAACTCAACAAGGCTCTCGCTGCTGATCCAAGGATCGAGATTTGTATGCTCCCTGTTGGTGATGGAATCACTCTCTGTCGTCGGATCAACTGA 750 46.8 MASTNNEQENQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGQILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIN 249
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 5859248 5860633 + Cp4.1LG15g04800.1 Cpe15g00488 481946
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00488 249 MobiDBLite consensus disorder prediction 1 20 - -
Cpe15g00488 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
Cpe15g00488 249 CDD AdoMet_MTases 87 188 - -
Cpe15g00488 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171
Cpe15g00488 249 PANTHER O-METHYLTRANSFERASE-RELATED 6 249 - -
Cpe15g00488 249 Pfam O-methyltransferase 37 248 IPR002935 GO:0008171
Cpe15g00488 249 MobiDBLite consensus disorder prediction 1 18 - -
Cpe15g00488 249 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 6 249 - -
Cpe15g00488 249 Gene3D Vaccinia Virus protein VP39 23 249 IPR029063 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00580 Cpe-Chr1:3351653 Cpe15g00488 Cpe-Chr15:5859248 6.27E-49 transposed
Cpe09g00585 Cpe-Chr9:4041929 Cpe15g00488 Cpe-Chr15:5859248 5.02E-18 transposed
Cpe15g00488 Cpe-Chr15:5859248 Cpe04g00280 Cpe-Chr4:3500225 1.41E-54 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00488 K00588 - csv:101205648 489.189