Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe15g00488 | ATGGCATCCACCAACAACGAACAAGAAAACCAGAACCAAGCCGGAAGGCACCAGGAAGTCGGCCACAAGAGCCTCTTGCAGAGCGATGCTCTGTATCAGTACATTCTTGAGACGAGCGTTTATCCAAGAGAGCCTGAATCGATGAAGGAATTGAGAGAATTGACTGCCAAACATCCATGGAACATCATGACTACATCGGCGGACGAAGGACAGTTCTTAAACATGCTTTTGAAACTAATTAATGCGAAGAAAACGATGGAGATTGGAGTATACACTGGCTACTCTCTTCTCGCAACAGCCCTAGCACTTCCGGAAGACGGACAGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTCGGTTTACCGGTGATTGAGAAAGCCGGCGTTGCTCACAAGATCGAGTTCAAGGAAGGCCCCGCTCTCCCTGTTCTTGACGAGATGGTGGCTGATGAGAAAAATCATGGAAGCTACGACTTCATCTTTGTGGACGCTGATAAAGATAACTACATAAACTATCATAAGAGATTGATCGATTTAGTGAAAGTTGGAGGATTGATCGGGTACGACAACACACTATGGAACGGATCAGTGGTTGCTCCACCCGACGCCCCATTGCGCAAGTATGTTAGGTACTACAGGGACTTTGTGTTGGAACTCAACAAGGCTCTCGCTGCTGATCCAAGGATCGAGATTTGTATGCTCCCTGTTGGTGATGGAATCACTCTCTGTCGTCGGATCAACTGA | 750 | 46.8 | MASTNNEQENQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGQILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIN | 249 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 5859248 | 5860633 | + | Cp4.1LG15g04800.1 | Cpe15g00488 | 481946 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe15g00488 | 249 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Cpe15g00488 | 249 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 28 | 247 | IPR029063 | - | |
| Cpe15g00488 | 249 | CDD | AdoMet_MTases | 87 | 188 | - | - | |
| Cpe15g00488 | 249 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 24 | 248 | IPR002935 | GO:0008171 | |
| Cpe15g00488 | 249 | PANTHER | O-METHYLTRANSFERASE-RELATED | 6 | 249 | - | - | |
| Cpe15g00488 | 249 | Pfam | O-methyltransferase | 37 | 248 | IPR002935 | GO:0008171 | |
| Cpe15g00488 | 249 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Cpe15g00488 | 249 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 1 | 6 | 249 | - | - | |
| Cpe15g00488 | 249 | Gene3D | Vaccinia Virus protein VP39 | 23 | 249 | IPR029063 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g00580 | Cpe-Chr1:3351653 | Cpe15g00488 | Cpe-Chr15:5859248 | 6.27E-49 | transposed | |
| Cpe09g00585 | Cpe-Chr9:4041929 | Cpe15g00488 | Cpe-Chr15:5859248 | 5.02E-18 | transposed | |
| Cpe15g00488 | Cpe-Chr15:5859248 | Cpe04g00280 | Cpe-Chr4:3500225 | 1.41E-54 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe15g00488 | K00588 | - | csv:101205648 | 489.189 |