Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00537 ATGGCGGTTTCCGGTAGCAATTCGACCCAGATTCATCCCTCCGACGAATCTTCCTCCAGTTCTTCCGAGAGTTCACTATCCAACTTGAAAGTCTACGCCGCGATCGGTATAATTACTGCATGTGTGATTGCAGCGTCTGCTCTGATCTTCCTCTGTATCCGTAAAAATAGGGACTCGAGGAAGCACAAAATGCGGGTGAAGCATAGTTCCGGATTAATTCCGTTGTTCTCCAAGGAGATCGCTGAGATCAATGAGTCCGATCGGAGTGTGGATTGCGAGAAAGGGGAAGTCGTTAGGGTTGAGAATAAGAAGGAAACTGAGTTCGAGACTGGAGTAGGTAAGAAGAGTCAAGAGAGCGACGTGTCCGGCGGCGGTCGAAGCGATGTGCCGGTGGAGGATCAGAACTTAGGGTGGGGACGGTGGTACAGCTTGAAGGAACTCGAAATGGCAACCAATGGGTTTCTGGAAGAGAATGTGATCGGAGAAGGAGGCTATGGCATCGTGTACAGAGGCGTTTCGCCGGACGGCTCCGTCGTCGCCGTGAAGAATCTTCTTAACAACAAGGGTCAGGCAGAGAAAGAGTTCCAGGTTGAAGTAGAGGCCATTGGAAAAGTAAGGCACAAGAACTTGGTGGGTCTGATGGGTTATTGTGCCGAAGGAACACAGAGGATGCTTGTGTATGAATTTGTTGATAATGGCAACTTGGAGCAATGGTTACATGGTGATGTGGGGCCTGTTAGCCCTCTAACATGGGATATTAGGATGAAAATTGCCCTTGGAACAGCAAAAGGTTTGGCTTATTTGCATGAGGGTTTAGAACCGAAAGTTGTGCACCGTGATATAAAATCTAGCAACATTCTCTTAGATAGAAAATGGAATGCGAAAGTGTCTGATTTTGGACTTGCGAAGCTCTTACAACCCGAAGCGAGCTACGTAACTACTCGTGTAATGGGGACCTTTGGATATGTTTCCCCTGAGTATGCAAGTACAGGCATGCTTAATGAGGGGAGTGATGTATATAGTTTCGGAGTTCTACTTATGGAGATAATTACTGGCCGAAGCCCAATCGACTATTCCAGGCCTCCAGGAGAGGAGCTTCGATCCGTGCGAGAGAAAGATAACCAGCCTTCTAGCTTAGACGTGCCGAGTAAACTCCCAATGAAGCATGCTGGTATATAG 1179 47.84 MAVSGSNSTQIHPSDESSSSSSESSLSNLKVYAAIGIITACVIAASALIFLCIRKNRDSRKHKMRVKHSSGLIPLFSKEIAEINESDRSVDCEKGEVVRVENKKETEFETGVGKKSQESDVSGGGRSDVPVEDQNLGWGRWYSLKELEMATNGFLEENVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEKEFQVEVEAIGKVRHKNLVGLMGYCAEGTQRMLVYEFVDNGNLEQWLHGDVGPVSPLTWDIRMKIALGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRKWNAKVSDFGLAKLLQPEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEELRSVREKDNQPSSLDVPSKLPMKHAGI 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6249056 6253099 - Cp4.1LG15g05380.1 Cpe15g00537 481995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00537 392 MobiDBLite consensus disorder prediction 105 127 - -
Cpe15g00537 392 PANTHER OS03G0227900 PROTEIN 15 364 - -
Cpe15g00537 392 PANTHER OS01G0323000 PROTEIN 15 364 - -
Cpe15g00537 392 Pfam Protein kinase domain 156 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00537 392 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Cpe15g00537 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Cpe15g00537 392 Gene3D Phosphorylase Kinase; domain 1 131 229 - -
Cpe15g00537 392 MobiDBLite consensus disorder prediction 1 23 - -
Cpe15g00537 392 ProSiteProfiles Protein kinase domain profile. 154 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00537 392 CDD STKc_IRAK 160 372 - -
Cpe15g00537 392 MobiDBLite consensus disorder prediction 358 392 - -
Cpe15g00537 392 SMART serkin_6 154 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00537 392 Gene3D Transferase(Phosphotransferase) domain 1 230 388 - -
Cpe15g00537 392 SUPERFAMILY Protein kinase-like (PK-like) 133 367 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00123 Cpe15g00537 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00537 Cpe-Chr15:6249056 Cpe19g00628 Cpe-Chr19:5107618 1.32E-138 dispersed
Cpe15g00537 Cpe-Chr15:6249056 Cpe04g00123 Cpe-Chr4:1113601 1.03E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62857 PF00069 Pkinase 7.30E-45 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00537 - - csv:101219201 672.544