Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00555 ATGGGCGATACCCGAGGAGGTTGCTGTCCATCCATGGATCTGTTCCGCTCCGAGCCGATGCAGCTGGTGCAGCTCATCATTCCCATCGAGTCTGCGCATCGCACTATCTCCTACCTTGGTGATCTCGGCCTTCTCCAATTCAAAGATCTCAATGCCGAAAAAAGCCCGTTCCAGCGTACTTATGCTGCACAGATTAAAAGATGTGGAGAGATCGCACGCAAATTGAATTTTTTCAAGGAACAAATGTTGAAGGCTGGGTTGCCAAGCAAAAGCTCCATTTCACAAGTTGATATCAATATAGATGACCTTGAGGTCAAACTTGGTGAGCTTGAGGCAGAACTGATTGAGATAAATGCTAATAGTGAGAAGCTACAGCGTTCCTACAATGAACTTGTGGAGTATAAGCTTGTTCTACAGAAGGCTGGTGACTTTTTCGGTGCAGCGCAAAGCAGTGCCATAGAGCAGCAAAGAGAGTTTGAATCAAGACGAGTTGGTGGAGATTCAATAGAAGTTCCATTGTTGTTGGAACAAGAATCATCTGTGGATCAGTCGAAGCCGGTTAATTTGGGATTTCTTTCTGGTCTTGTTCCTCGGGGAAAATCTATGGCATTTGAGAGGATACTTTTTCGTGCTACCAGGGGTAATGTGTTTCTGAAGCAGGCTGTAGTTGAGGATCCTGTTCCAGATCCTATCTCTGGAGAGAAGGTTGAGAAAAACGTGTTTGTTGTTTTCTATTCTGGAGAAAGAGCAAAGAATAAGATTCTAAAAATATGTGAGGCATTTGGAGCAAATCGATACCCTTTTACTGAGGACTTGGCGAAACAATCCCAAATGATTGCCGAGGTTTCTGGAAAACTGGCTGAGCTGAAGACTACCATAGATGTAGGGCTGCTGCACCGGGCTAATCTATTGCAGACTATTGGAGAACATTTTGAAAATTGGAATCTCTTGGCGAGGAAGGAAAAATCCATATACCATATCTTGAACATGCTTAGCCTTGATGTAACCAAACAATGTCTGGTCGCGGAGGGGTGGGGTCCTGTTTTTGCAACAAAACAGATTCAGGAAGCACTCCAGCGAGCAGCATCTGATTCCAACTCCCAAGTTGGAGCAATTTTCCAGGTTTTATTAACTACAGAAGCACCGCCTACTTATTTTCGAACAAACAAATTCTCCACTGCTTTTCAAGAAATTGTTGATGCATATGGGGTGGCAAAGTATCAAGAAGCCAATCCTGGTGTATATACCATCGTCACGTTCCCATTTCTATTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGTCTGTTACTTGCAACACTGTATTTTATATTGCGGGAAAAGAAACTTTCCTCTCAGAAGCTTGGAGATATCACTGAAATGGCCTTCGGTGGACGCTATGTCATTTTAATGATGTCACTATTTTCAATATACACAGGTCTGATCTATAATGAGTTCTTCTCAGTCCCATTTGAACTGTTTGGTCGCTCAGCCTATGCATGTCGTAGTCCTGATTGCAGGTATATCAATGTAACCTTTAATGTACTCTGTCCATGTTTTTCTGTAATTCATGCTATGAGACTTGGTAATGATGGTCAGTCCTGTAATCCTCGCCATTGTAGTGATTCTACCACTGTGGGGTTGATAAAGGCGGGTTCTACGTATCCGTTTGGCTTGGATCCTGTATGGCATGGCACTCGAAGTGAGCTTCCATTTCTTAACTCTCTGAAAATGAAAATGTCTATCCTCCTTGGAGTTGCACAAATGAACCTTGGAATTATAATAAGCTATTTCAATGCTACATTTTTCAAGAACAGCATCAATATTTGGTTCCAATTCCTTCCACAAATGATATTTCTGAACAGCCTTTTCGGTTATCTTTCCCTTCTCATCATCGTAAAGTGGTGCACTGGTTCGAACGCCGATCTGTACCACGTAATGATATACATGTTTCTCGGCCCCACTGAAGATCTGGCTGAAAATCAACTTTTTCCTGGGCAGAAAAATGTTCAGATTGTGCTGCTCTTACTGGCTCTTGTTGCTGTACCATGGATGCTGCTTCCAAAGCCTTTCCTTTTGAAGAAACAGCACGAACAGAGGTTCCAAGGTCAGTCTTATGCACCTCTTCCAAGTGGTGATGATTCCCTTGAGTTGGATTCGCATCACGATTCACATGGTCATGAGGAGTTCGAGTTCAGTGAGGTTTTTGTGCATCAACTTATACACACCATTGAATTTGTGCTTGGAGCAGTGTCAAATACAGCTTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCGCACTCAGAGTTGTCAAGCGTGTTTTACGACAAGGTTCTCGTTCTATCTGCGGGGTTCAACAACATTGTAATCTTAATAGTAGGCATCATTGTTTTCATTTTCGCTACCGTTGGTGTGTTGCTGTTGATGGAGACTTTAAGTGCTTTCCTTCACGCACTGCGTCTTCATTGGGTCGAGTTCCAAAACAAGTTCTACGAGGGAGACGGCTACAAATTCCTTCCTTTCTCATTTGCATTGCTAGATGAAGATGATGAATAA 2559 42.87 MGDTRGGCCPSMDLFRSEPMQLVQLIIPIESAHRTISYLGDLGLLQFKDLNAEKSPFQRTYAAQIKRCGEIARKLNFFKEQMLKAGLPSKSSISQVDINIDDLEVKLGELEAELIEINANSEKLQRSYNELVEYKLVLQKAGDFFGAAQSSAIEQQREFESRRVGGDSIEVPLLLEQESSVDQSKPVNLGFLSGLVPRGKSMAFERILFRATRGNVFLKQAVVEDPVPDPISGEKVEKNVFVVFYSGERAKNKILKICEAFGANRYPFTEDLAKQSQMIAEVSGKLAELKTTIDVGLLHRANLLQTIGEHFENWNLLARKEKSIYHILNMLSLDVTKQCLVAEGWGPVFATKQIQEALQRAASDSNSQVGAIFQVLLTTEAPPTYFRTNKFSTAFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFELFGRSAYACRSPDCRYINVTFNVLCPCFSVIHAMRLGNDGQSCNPRHCSDSTTVGLIKAGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFKNSINIWFQFLPQMIFLNSLFGYLSLLIIVKWCTGSNADLYHVMIYMFLGPTEDLAENQLFPGQKNVQIVLLLLALVAVPWMLLPKPFLLKKQHEQRFQGQSYAPLPSGDDSLELDSHHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLVLSAGFNNIVILIVGIIVFIFATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFLPFSFALLDEDDE 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6387031 6397072 - Cp4.1LG15g05610.1 Cpe15g00555 482013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00555 852 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 521 852 - -
Cpe15g00555 852 PANTHER VACUOLAR PROTON ATPASES 6 507 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe15g00555 852 Coils Coil 93 127 - -
Cpe15g00555 852 PIRSF ATP6V0A1 10 852 IPR026028 GO:0000220|GO:0046961
Cpe15g00555 852 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 507 - -
Cpe15g00555 852 PANTHER VACUOLAR PROTON ATPASES 521 852 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe15g00555 852 Pfam V-type ATPase 116kDa subunit family 38 844 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00112 Cpe15g00555 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00871 Cpe-Chr5:5717217 Cpe15g00555 Cpe-Chr15:6387031 0 dispersed
Cpe15g00555 Cpe-Chr15:6387031 Cpe16g00562 Cpe-Chr16:6414568 0 dispersed
Cpe11g00231 Cpe-Chr11:1241860 Cpe15g00555 Cpe-Chr15:6387031 1.16E-26 wgd
Cpe15g00555 Cpe-Chr15:6387031 Cpe04g00112 Cpe-Chr4:997971 0 wgd
Cpe15g00555 Cpe-Chr15:6387031 Cpe07g00387 Cpe-Chr7:2501426 5.44E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00555 K02154 - csv:101211364 1481.85