Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00593 ATGGAGGACGGAGAGCTTGATTTTTCGAATCAAGAAGTGTTTTCGAGTCCAAATATGGAGATTCCGAGCAGTTGTTCAATGGATGGTTTCTTTGATGAACTTCTGAAGGATACTCATACTTGTACTCACACGCATACTTGCAATCCACCGGGCCCTGACTACTCTCATACTCACACATGTTTTCATGTCCACACTAAGATTGTCCCTGCTCCAAGTGAAGAAGACAAGGTTGTTACTGATGACACTGCGGAATCGACCGAGAAGAAGTCGAAGAAACGGCCGTTGGGTAACCGGGAAGCTGTTCGTAAGTACCGGGAGAAGAAGAAGGCTAGGGCAGCTTCATTAGAGGACGAGGTTGTTAGATTGAGGGCTTTGAATCAGCATTTGGTGAAGAGGTTGCAGGGGCAGGCAGCACTTGAGGCTGAGGTTGCTAGGCTTAAGTGTTTGCTTGTGGATATTAGGGGCAGAATTGAAGGGGAGATTGGTTCTTTCCCATATCAGAAAGCTGTTAATCCTAACTTGGCTAATCCAAGCATCCCTGGTGCTTATTTGATGAACCCATGTAATGTCCGGTGTGAGAATGATCAAATTTACTGCCTCCATCCCGGGGTCGATGGTAGCAGAAGCAGTGAAGGTGCTGTGATAAATGGACAGAGTTTTGGTGCTTGTGAATTTGAAAATCTTCAATGTTTGGCTAGTCATGGCTTGACATCGGAAGAGCTACCCGGGTGTGGACTACGGAATGCAGTCTCGAACGATATTTCTTCAGGAGCAATGAAGAAGAAAGGAGAACGGACTGAGGAAAACGTAAAGAGACATGAACCTGATGAACTGATCTGTCAAACATCAACGTCTACACTCCGGCAATGCCCGTGGGGTGGTGCATATACCTCAGTCACTGCAACATCTGATTACCTTCTCGTTATCGATCTTCTCTCGACCCATTTGAGGTACTCGAAAATGGCAGAGCTTCTTCATATGTTGAGAAGTGATATTGAGTAG 1002 45.91 MEDGELDFSNQEVFSSPNMEIPSSCSMDGFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLVKRLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLANPSIPGAYLMNPCNVRCENDQIYCLHPGVDGSRSSEGAVINGQSFGACEFENLQCLASHGLTSEELPGCGLRNAVSNDISSGAMKKKGERTEENVKRHEPDELICQTSTSTLRQCPWGGAYTSVTATSDYLLVIDLLSTHLRYSKMAELLHMLRSDIE 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6688098 6691339 + Cp4.1LG15g05880.1 Cpe15g00593 482051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00593 333 Coils Coil 98 132 - -
Cpe15g00593 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Cpe15g00593 333 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 242 - -
Cpe15g00593 333 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Cpe15g00593 333 Gene3D - 75 153 - -
Cpe15g00593 333 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Cpe15g00593 333 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Cpe15g00593 333 MobiDBLite consensus disorder prediction 71 97 - -
Cpe15g00593 333 PANTHER BASIC LEUCINE ZIPPER 23 1 242 - -
Cpe15g00593 333 CDD bZIP 91 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00593 Cpe16g00318 CCT
Cpe05g01371 Cpe15g00593 CCT
Cpe04g00591 Cpe15g00593 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00593 Cpe-Chr15:6688098 Cpe16g00318 Cpe-Chr16:5045606 1.69E-126 wgd
Cpe15g00593 Cpe-Chr15:6688098 Cpe04g00591 Cpe-Chr4:6254361 3.76E-163 wgd
Cpe15g00593 Cpe-Chr15:6688098 Cpe05g01371 Cpe-Chr5:9639800 1.83E-134 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50631 PF07716 bZIP_2 5.30E-14 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00593 K25785 - csv:101208161 479.174