Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00605 ATGTTATCGGAGTTCATGGATTTCTTGAGGGCTTGTTTCCGACCGAGCTCCGATCGGTATGTGGCGGGGGATATCAAGGGGAGGCAGGACGGGCTGCTATGGTACAAAGATAGTGGACAACATTTGAATGGTGAGTTTTCAATGTCTGTGGTTCAAGCCAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCAGGCAGTTTGAGCATACATGAGTCTGGCCCCAGAGGAACGTTTGTTGGTGTGTATGATGGCCATGGAGGCCCCGAGACTTCTCGGTATATCTGTGATCATCTCTTCCAGCATCTCAAGAGGTTTACTTCTGAGCAAGATTCAATGTCTGCGGATGTAATACGCAAGGCATTCCAAGCGACAGAAGATGGTTTTCTTTCAATAGTTCAAAGGCAATGGTCAACAAATCCTCAAATTGCAGCTGTTGGTTCATGTTGTCTAGTTGGTGTAATCTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCACGAGCTGTTTTGGGTAGAGTAGTGAAGGCGACTGGCAAGGTTCTAGCCGTTCAGTTATCAACAGAGCACAATGTTTCTAATGAGTCAGTGAGGCAAGAGCTGCAATCTTTACACCCTGAAGACTCAAAGATTGTGGTTTTAAAGCATAATGTTTGGCGAGTGAAGGGCATAATACAGGTTAGTTAG 690 45.22 MLSEFMDFLRACFRPSSDRYVAGDIKGRQDGLLWYKDSGQHLNGEFSMSVVQANNLLEDQSQIESGSLSIHESGPRGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDSMSADVIRKAFQATEDGFLSIVQRQWSTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRVVKATGKVLAVQLSTEHNVSNESVRQELQSLHPEDSKIVVLKHNVWRVKGIIQVS 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6773776 6775865 + Cp4.1LG15g06080.1 Cpe15g00605 482063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00605 229 CDD PP2Cc 46 229 IPR001932 -
Cpe15g00605 229 SUPERFAMILY PP2C-like 50 229 IPR036457 -
Cpe15g00605 229 ProSiteProfiles PPM-type phosphatase domain profile. 45 229 IPR001932 -
Cpe15g00605 229 SMART PP2C_4 37 229 IPR001932 -
Cpe15g00605 229 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 6 229 - -
Cpe15g00605 229 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Cpe15g00605 229 Gene3D - 33 229 IPR036457 -
Cpe15g00605 229 PANTHER ALPHABET, ISOFORM E-RELATED 6 229 - -
Cpe15g00605 229 Pfam Protein phosphatase 2C 72 229 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01363 Cpe15g00605 CCT
Cpe15g00605 Cpe16g00325 CCT
Cpe04g00604 Cpe15g00605 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00688 Cpe-Chr10:3957063 Cpe15g00605 Cpe-Chr15:6773776 8.60E-129 dispersed
Cpe15g00605 Cpe-Chr15:6773776 Cpe19g00880 Cpe-Chr19:6451702 3.11E-128 dispersed
Cpe15g00605 Cpe-Chr15:6773776 Cpe16g00325 Cpe-Chr16:5096653 1.72E-113 wgd
Cpe15g00605 Cpe-Chr15:6773776 Cpe04g00604 Cpe-Chr4:6319570 5.40E-157 wgd
Cpe15g00605 Cpe-Chr15:6773776 Cpe05g01363 Cpe-Chr5:9586872 1.03E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00605 - K01102 csv:101211601 420.239