Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00630 ATGCCTTTCTTCTTCCCCCTTCTCTTCCTCTCCCTCCTCTCCGCCGCCACCGCCTGTGATCGCTGTGTTCATCAAGCCAAAGCCGCCTTCTACCAGGACGAGGCCGCCGGAGCATACAGAGGCGCCTGTGGCTATGGCGATCTGACACCGGCGCTCGCAAATGGCTACTTCTCCGCCATCATGCCTCCTCTTTACAAATACGGCGCTGGCTGTGGCGCCTGTTTTCAAGTAAACATTCCCAAACAATCCCCTGTTTCCGCCTCCCCTGTTTCACCTCCCCTGTTTTGCTTGTTCGTGATCGGAAATGCTCTGTTTTTGCAGGTACGGTGCAAGAATGACAAAATTTGCACCAAAGAAGGGACCAAAATTGTCGTGACGGATCGAAATGACAACACATACACCGGATTGGTTCTTAGCCAAAAGGCTTTTGGTGAAATGGCTGTGAGTGGGAAAGATGGATTGCTTATGAGTTATGGAGTTGTGGACGTGGAATTCAAAAGGATTCCTTGTGAATACAAGAACCAAAACTTGTTGATTAGAGTGGAAGAATGGAGTCAATATCCAAGTTACTTAGCTATTAAATTGCTTTATCAAGGTGGTCAAACGGAAATTGTCGGGATGGATATAGCTCAGGTTGGTTATTCAAATTGGGATTATATGGGTAGGAACTACGGAGCTGTGTGGGAGACCAAGAAGCCGTTACCAAAAGGGCCATTACAGTTGCGATTCGTGGTGACTTCTGGATACGATGGAAAGTGGATTTGGGCTAAGTATGTGCTTCCTGCTGATTGGAGACCTGGACTCATTTACGATACTGGAGTTCAAATCTATGATATTGCTAAGGAAGGTTGTCCGACAGAGCAATGTGGTGATGGACAGTGGCGACGACGATAA 894 47.65 MPFFFPLLFLSLLSAATACDRCVHQAKAAFYQDEAAGAYRGACGYGDLTPALANGYFSAIMPPLYKYGAGCGACFQVNIPKQSPVSASPVSPPLFCLFVIGNALFLQVRCKNDKICTKEGTKIVVTDRNDNTYTGLVLSQKAFGEMAVSGKDGLLMSYGVVDVEFKRIPCEYKNQNLLIRVEEWSQYPSYLAIKLLYQGGQTEIVGMDIAQVGYSNWDYMGRNYGAVWETKKPLPKGPLQLRFVVTSGYDGKWIWAKYVLPADWRPGLIYDTGVQIYDIAKEGCPTEQCGDGQWRRR 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7023144 7024626 + Cp4.1LG15g06270.1 Cpe15g00630 482088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00630 297 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 175 IPR007112 -
Cpe15g00630 297 PANTHER EXPANSIN-LIKE A1-RELATED 106 291 - -
Cpe15g00630 297 SUPERFAMILY PHL pollen allergen 176 271 IPR036749 -
Cpe15g00630 297 Pfam Lytic transglycolase 60 164 IPR009009 -
Cpe15g00630 297 SUPERFAMILY Barwin-like endoglucanases 106 174 IPR036908 -
Cpe15g00630 297 Pfam Expansin C-terminal domain 180 261 IPR007117 -
Cpe15g00630 297 Gene3D - 172 277 IPR036749 -
Cpe15g00630 297 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 189 272 IPR007117 -
Cpe15g00630 297 PANTHER EXPANSIN-LIKE A1-RELATED 5 78 - -
Cpe15g00630 297 PANTHER EXPANSIN-B3 106 291 - -
Cpe15g00630 297 PANTHER EXPANSIN-B3 5 78 - -
Cpe15g00630 297 SUPERFAMILY Barwin-like endoglucanases 22 82 IPR036908 -
Cpe15g00630 297 Gene3D - 11 171 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00620 Cpe-Chr4:6412951 Cpe15g00630 Cpe-Chr15:7023144 8.47E-06 dispersed
Cpe05g00221 Cpe-Chr5:1245754 Cpe15g00630 Cpe-Chr15:7023144 5.02E-40 dispersed
Cpe15g00303 Cpe-Chr15:3907263 Cpe15g00630 Cpe-Chr15:7023144 1.26E-48 dispersed
Cpe15g00628 Cpe-Chr15:6998806 Cpe15g00630 Cpe-Chr15:7023144 1.57E-06 dispersed
Cpe15g00630 Cpe-Chr15:7023144 Cpe04g00772 Cpe-Chr4:7401232 1.42E-26 dispersed
Cpe15g00629 Cpe-Chr15:7008098 Cpe15g00630 Cpe-Chr15:7023144 4.14E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00630 - - csv:101217243 490.73