Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00638 ATGAATTCAGATATCAACTCCCTCGCCATTTCCAGTAGTAGCAGCTCTGCCTTGGACCTCGCTATTCCATTTCAACTCGGAATCGTCGAAACTACTTTCGATTCCAAGCGCCGCCATAATCCACGCAAGAAGCGGTCAAGAACTGAAAATGCCTCCACTGCTGTCGTCGGCTCCAAGGCTAAGTATAGAAAGAAGCCGGATCCTTCTGCGCCGAAGATCACTCCTCCGTGTAGTGAGTGTGGGAGGAGGTTTTGGTCGGATAAAGCGCTTTTTGGTCATATGAGGTGTCATCCTGAACGACAATGGCGAGGGATTAATCCGCCGGTTAGTTTCCGTCGCTCGGTTTCGGTTTCTCCTTTTAGACCTAGAGCTGATTTGGAAGAATCGGCGTTTACGGAAGAGGAACAGGACGTCGCTAATTGCTTGTTAGTGCTTGCCGATTGCCCTAGTGCGATCGCTAGGGTTTCCGATTTTCGATTCGAATGCGCGAGTTGTAAAAAAGTGTTTGGATCGCACCAGGCGCTTGGAGGACATAGGGCAAGTCACAAGAATGTGAGAGGCTGTTCCGCCATGGCGAAGAGCGATGAAGAAATAGAACATGATGCTCTGTTTGGACATTGTGGTCATGATTTGAGCATCAATCTGGAGGATAAAATGTCGATGATTTTAGGAACAGCAGCAGGGCATAAGTGTAGTGTATGTATGAGGGTTTTTGCGAGTGGTCAAGCACTTGGTGGCCATATGAGATGCCATTGGGAGAGAGTGGAGGAGAATGCAGCTACAGAAGAGGGGTTTCTTAACTTGGACTTGAACATGCCTGCCCCTGTTGAAGATGGCTCTTCTTCTTCGTATTCATCAGGTCTCACTCTTGATCTTAGGCTTTTCGTATATGCTGTAACATTCATATCTGTTTCTGGCTCTATTGGCTACACATTTTAG 939 47.5 MNSDINSLAISSSSSSALDLAIPFQLGIVETTFDSKRRHNPRKKRSRTENASTAVVGSKAKYRKKPDPSAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINPPVSFRRSVSVSPFRPRADLEESAFTEEEQDVANCLLVLADCPSAIARVSDFRFECASCKKVFGSHQALGGHRASHKNVRGCSAMAKSDEEIEHDALFGHCGHDLSINLEDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNMPAPVEDGSSSSYSSGLTLDLRLFVYAVTFISVSGSIGYTF 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7110257 7111273 + Cp4.1LG15g06370.1 Cpe15g00638 482096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00638 312 SMART c2h2final6 75 97 IPR013087 -
Cpe15g00638 312 SMART c2h2final6 160 182 IPR013087 -
Cpe15g00638 312 SMART c2h2final6 229 251 IPR013087 -
Cpe15g00638 312 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Cpe15g00638 312 SUPERFAMILY beta-beta-alpha zinc fingers 228 253 IPR036236 -
Cpe15g00638 312 SUPERFAMILY beta-beta-alpha zinc fingers 76 182 IPR036236 -
Cpe15g00638 312 ProSitePatterns Zinc finger C2H2 type domain signature. 162 182 IPR013087 -
Cpe15g00638 312 ProSitePatterns Zinc finger C2H2 type domain signature. 231 251 IPR013087 -
Cpe15g00638 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 229 251 IPR013087 -
Cpe15g00638 312 MobiDBLite consensus disorder prediction 33 73 - -
Cpe15g00638 312 Gene3D Classic Zinc Finger 158 251 - -
Cpe15g00638 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 187 IPR013087 -
Cpe15g00638 312 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 20 294 - -
Cpe15g00638 312 Pfam C2H2-type zinc finger 77 99 - -
Cpe15g00638 312 Pfam C2H2-type zinc finger 159 183 - -
Cpe15g00638 312 Pfam C2H2-type zinc finger 229 253 - -
Cpe15g00638 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Cpe15g00638 312 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 20 294 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00638 Cpe16g00350 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00712 Cpe-Chr10:4077175 Cpe15g00638 Cpe-Chr15:7110257 4.15E-09 dispersed
Cpe15g00638 Cpe-Chr15:7110257 Cpe05g00395 Cpe-Chr5:2240294 2.62E-22 dispersed
Cpe15g00638 Cpe-Chr15:7110257 Cpe16g00350 Cpe-Chr16:5262364 1.08E-33 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00638 - - cmax:111468261 556.984