Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00673 ATGGGTTATATGTGTGATTTCTGTGGGCAACAAAGGTCGTTTGTTTACTGTCGATCCGATGCTGCAGCTTTGTGCTTATCTTGTGACCGTAATGTTCATTCTGCTAACGCCTTGTCGAGGCGACACTCAAGAACGTTGTTATGTGATCGCTGTCATTCACAAGCAGCATTTGTAAGATGTCCTGAAGAGAATATTTCACTTTGTCAAAACTGTGATTACATGGGGCATAGCTCATCCGCCTCCATTTCATCTCGAAAGAGGCAACCAATCAATTGTTACTCGGACTGCCCGACAGCTGCGGAGCTCTCATCTATCTGGTCATTTGTTCTGGATCTCCCTTCTGGAAGCGATGCTTGCGAGCAAGAATTAGGATTGATGAGCATTGCCGAAAATAGTGCAGTAAACGCCTGGGGCCCTGATGATAAAGCTGGTCAAAATGCATCTGGTGTCGATGAAACCAACGAATTCTCGAGTGGGGATAAATCGATTTGGTTCGGGTCCTCTTCAGCGCCTCAATATTTATCCAAGCCTCACATTATGGACCAACCAATTACTCCAGGTGCATCTTCACCCAAGTTGCACTATCCCGGAACAAAAGGTCCTGATTTCGACATTGACGATGACCTCTACGAGAGTTTGAATATGGATGAAGATTTGAATATTGAAAACTATGAAGAACTATTTGGTGTATCCCTCAGTTATTCTGAAGAATTGTTAGAGAATGGTGGTATTGATAGCTTGTTTAGGATCAAAAGCTTAGCTGCTGCTAAATCTGGTTGCGCTGGTGCGACTGATGCAAAGGGGCCGTCAGGTTTAGCTAATAATATGATACAGCCTGCAAGCAGTAATGCAGCATCAGCAGATTCTGTGATGAGTGCGAAGACTGACCCGATTCTTTGTTATAACAATAAGCAAGAGCATTCCAGTCGATCGTTTTCTGGCATGACTGGAGAGAGTAGTGCAGGCGAACATCAAGACTGTGGAGCTTCATCAATGCTTCTGATGGGAGAGCCTCCATGGTGTTCTATGGCTACAGAGAGTTCGTTCCAATCATCGAATCGTAGTGATGCTGTAATGCGCTACAAGGAAAAGAAGAAAGCTCGAAAGTTTGAAAAGAAGGTGAGGTATGCCTCTCGCAAAGTGCGGGCCGATACTCGAAGACGGGTCAAGGGGCGCTTTGTTAAAGCTGGAGAAGCTTATGACTATGATCCGATGAGTCAAACCAGAAGCTACTGA 1236 44.98 MGYMCDFCGQQRSFVYCRSDAAALCLSCDRNVHSANALSRRHSRTLLCDRCHSQAAFVRCPEENISLCQNCDYMGHSSSASISSRKRQPINCYSDCPTAAELSSIWSFVLDLPSGSDACEQELGLMSIAENSAVNAWGPDDKAGQNASGVDETNEFSSGDKSIWFGSSSAPQYLSKPHIMDQPITPGASSPKLHYPGTKGPDFDIDDDLYESLNMDEDLNIENYEELFGVSLSYSEELLENGGIDSLFRIKSLAAAKSGCAGATDAKGPSGLANNMIQPASSNAASADSVMSAKTDPILCYNNKQEHSSRSFSGMTGESSAGEHQDCGASSMLLMGEPPWCSMATESSFQSSNRSDAVMRYKEKKKARKFEKKVRYASRKVRADTRRRVKGRFVKAGEAYDYDPMSQTRSY 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7348210 7353959 + Cp4.1LG15g06640.1 Cpe15g00673 482131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00673 411 MobiDBLite consensus disorder prediction 137 156 - -
Cpe15g00673 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 411 - -
Cpe15g00673 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 411 - -
Cpe15g00673 411 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Cpe15g00673 411 MobiDBLite consensus disorder prediction 176 201 - -
Cpe15g00673 411 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Cpe15g00673 411 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Cpe15g00673 411 SMART bboxneu5 4 47 IPR000315 GO:0008270
Cpe15g00673 411 CDD Bbox1_BBX-like 5 47 - -
Cpe15g00673 411 Pfam CCT motif 354 396 IPR010402 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01383 Cpe15g00673 CCT
Cpe04g00659 Cpe15g00673 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01383 Cpe-Chr5:9738572 Cpe15g00673 Cpe-Chr15:7348210 3.32E-163 dispersed
Cpe08g00063 Cpe-Chr8:424354 Cpe15g00673 Cpe-Chr15:7348210 3.18E-07 dispersed
Cpe15g00673 Cpe-Chr15:7348210 Cpe16g00455 Cpe-Chr16:5785162 3.35E-62 dispersed
Cpe15g00673 Cpe-Chr15:7348210 Cpe16g00362 Cpe-Chr16:5315133 1.70E-96 wgd
Cpe15g00673 Cpe-Chr15:7348210 Cpe04g00659 Cpe-Chr4:6710458 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50637 PF06203 CCT 2.70E-16 CL0281 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00673 - - csv:101216326 732.25