Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe15g00729 | ATGGCACAGCTACCGCCGAAGATCCCAAATATGGCGACCAATTGGCCGGAATTTTCCCGTCAGAAAATCCCTTCAATGGAAAACTTTGCACCGACAACCACAACGGCGGTGGCGTTTACTCACCAGAACCCTTCTTGGGTCGATGAGTTTCTCGATTTTTCTTCCGCTAGACGTGGGTCTCACCGGCGCTCCGTTAGTGATTCCATCACATTCCTTGAAATGCCAATGCTGGAGGAAGATTACCGAGGCTCCACTGCGCCGCCACCGCCGCCGGGATCTGGCTCGGGCGACAGGAATGAATTTGATGGGTTCGAAGACGAGCAATTCCTATCGATGTTTAACGACGAAATCTCCGCCGGCGTGGCGCCTACCGTGTCGTCGTCGAACCCCTCCACGCCGTCTGATCACAACAGCATTAACGACGAGAAAGATGCCCAAAACGACGGCAAGCAAAATCAGAACAAAAACGAAACCGACGAAGTACAGAGCCAACAGCAATCGGATACTCAAACACAATCCAATTCCACGGCAACGGCGGCTTCCACCGAACGAATAACAGACCCCAAAAGAGTCAAAAGAATTCTGGCAAATCGGCAATCGGCTCAAAGATCACGAGTGAGGAAGCTTCAATACATATCAGAACTCGAACGAAGCGTTACATCGTTACAGGCTGAAGTTTCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCACCAGAGATTGCTTCTCAACGTCGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCACAGGATAAGATTTTTAAAGATGCTCATCAAGAGGCACTAAAAAGAGAGATAGAGAGACTGAGGCAAGTATATCACCAACAAAACATCAAGAAGACGGAAAATGCAGCGCCACCCATCACTGCCAGCGTCGCCGTCACGACAACCACCGCGACGGACGGCAAGCTTTGTAATGTAGGTCAAAAAGAGCAAGCTCCAAACGTGGTCGTTTAG | 984 | 50.81 | MAQLPPKIPNMATNWPEFSRQKIPSMENFAPTTTTAVAFTHQNPSWVDEFLDFSSARRGSHRRSVSDSITFLEMPMLEEDYRGSTAPPPPPGSGSGDRNEFDGFEDEQFLSMFNDEISAGVAPTVSSSNPSTPSDHNSINDEKDAQNDGKQNQNKNETDEVQSQQQSDTQTQSNSTATAASTERITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKTENAAPPITASVAVTTTTATDGKLCNVGQKEQAPNVVV | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 7664302 | 7667984 | + | Cp4.1LG15g07150.1 | Cpe15g00729 | 482187 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe15g00729 | 327 | PANTHER | BZIP FAMILY TRANSCRIPTION FACTOR | 1 | 295 | - | - | |
Cpe15g00729 | 327 | MobiDBLite | consensus disorder prediction | 76 | 102 | - | - | |
Cpe15g00729 | 327 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 192 | 207 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe15g00729 | 327 | Gene3D | - | 188 | 259 | - | - | |
Cpe15g00729 | 327 | Pfam | bZIP transcription factor | 189 | 233 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe15g00729 | 327 | MobiDBLite | consensus disorder prediction | 121 | 136 | - | - | |
Cpe15g00729 | 327 | CDD | bZIP_plant_RF2 | 190 | 240 | IPR044759 | GO:0003700|GO:0006355 | |
Cpe15g00729 | 327 | Coils | Coil | 268 | 288 | - | - | |
Cpe15g00729 | 327 | SMART | brlzneu | 185 | 249 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe15g00729 | 327 | MobiDBLite | consensus disorder prediction | 156 | 183 | - | - | |
Cpe15g00729 | 327 | PANTHER | BASIC LEUCINE ZIPPER 34 | 1 | 295 | - | - | |
Cpe15g00729 | 327 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 187 | 239 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe15g00729 | 327 | Coils | Coil | 140 | 160 | - | - | |
Cpe15g00729 | 327 | MobiDBLite | consensus disorder prediction | 137 | 155 | - | - | |
Cpe15g00729 | 327 | MobiDBLite | consensus disorder prediction | 121 | 191 | - | - | |
Cpe15g00729 | 327 | SUPERFAMILY | Leucine zipper domain | 189 | 243 | IPR046347 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe15g00729 | Cpe16g00416 | CCT | |
Cpe15g00729 | Cpe16g00416 | ECH | |
Cpe04g00711 | Cpe15g00729 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00486 | Cpe-Chr1:2806425 | Cpe15g00729 | Cpe-Chr15:7664302 | 7.03E-25 | dispersed | |
Cpe02g00683 | Cpe-Chr2:4307671 | Cpe15g00729 | Cpe-Chr15:7664302 | 2.14E-110 | dispersed | |
Cpe06g00663 | Cpe-Chr6:4128591 | Cpe15g00729 | Cpe-Chr15:7664302 | 1.24E-113 | dispersed | |
Cpe14g00328 | Cpe-Chr14:1960188 | Cpe15g00729 | Cpe-Chr15:7664302 | 3.43E-23 | dispersed | |
Cpe15g00729 | Cpe-Chr15:7664302 | Cpe06g00883 | Cpe-Chr6:5855265 | 3.93E-21 | dispersed | |
Cpe16g00665 | Cpe-Chr16:6981387 | Cpe15g00729 | Cpe-Chr15:7664302 | 1.53E-18 | dispersed | |
Cpe15g00729 | Cpe-Chr15:7664302 | Cpe16g00416 | Cpe-Chr16:5592361 | 2.11E-65 | wgd | |
Cpe15g00729 | Cpe-Chr15:7664302 | Cpe04g00711 | Cpe-Chr4:7042919 | 3.62E-151 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50642 | PF07716 | bZIP_2 | 3.50E-09 | CL0018 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe15g00729 | - | - | csv:101205276 | 486.493 |