Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00738 ATGGACGCCGCCCCTTCCCCTCCTCCTCCTCCTCCTCCACCACCACCTCCTCCTCCACCACCACCTCCTCCTCCGCCCCCTCCTCCTCCCCCCTCCCACCGTGTCCTCCTCGACGAGATGAACTTCTTCCCCGCCGATGACAAATCCCGCGTCCTCCTCGACTCCAAACTCGCCTCCCGGAATCGCAGTCCCACCAAACTCGACTTCAACGTTAACACAGGCTTGAATCTCTTGACCACCAATTCAAGTAGCGATCAATCCATGGTGGATGATGGAGTTTCTCCAAACCCAGAAGATAAAAGAGCCAAAAACGAGCGAGCAGTTCTTCAAGCTGAATTGGAGAGGCTAAAATCAGAGAATCTAAGATTAAAGGACATGTTAAATCAAGTGACGTCCAATTACCAAGCGCTACAGATGCACCTTGCAACCCTAATTCAAACCCAGAAAGCGGCCGACGTTGCCGATCCGATTGAGGAAAAGTCCGTCGCCGCCCAAGAAAAGGTCAGACACGGCGGCGGATGTAATACTAATAAGCTGGTCCCAAGGCAATTTATGGATCTTGGATTGGCCACGAATGCCGACACCGATGATCTCTCGATGTCATCCGACGGAAGGAGTGGAGAGCAGTCGCGATCTCCGGTTACAACCGGAGAAGTCGCGTCGGCCAAACGACATAGCCCCGATCAAGCCTCGAATTGGAGTTCCAATAATAATAATAAGGTTCCCAAATTAGGTTCTTCTTCTTCGTCTTCTTCGGCTAAAGATGTAGATCAAACTGAATCTACTATGAGAAAGGCTCGAGTCTCCGTTCGAGCTAGATCCGAAGCTCCCATGATCACGGACGGATGTCAATGGAGAAAATACGGGCAAAAAATGGCGAAGGGAAACCCTTGTCCACGAGCTTACTACCGGTGCACCATGGCGGCCGGCTGCCCGGTTAGAAAACAAGTTCAAAGATGTGCGGAAGACAAGACAATTTTGATAACAACGTACGAAGGAAACCACAACCATCCATTACCACCGGCGGCCATGGCAATGGCTTCAACAACATCATCGGCGGCTAGGATGCTTCTATCAGGGTCCATGTCAAGTGCGGATGGATTAATGAATCCAAACTTTTTAGCAAGAACCCTATTGCCATGCTCTTCAAGCATGGCTACAATCTCAGCCTCGGCTCCATTTCCCACCGTGACATTGGACCTAACACAAACCCCTAACCCTTTATTCCAACGCCCGGCTGCCGGCCACTTCCCAATTTCGTTTGCAGCCACTCCGCCTCAGAGCTTCCCCCAGATCTTTGGACATGCATTGTACAACCAATCAAAATTCTCCGGCCTCCAAATGTCGAAGGACATGGAAGCGCCGCCGCCTCCACCTCCGGCGTTGCAGAATCCATTGGCCGATACGTTGAGTGCGGCGAGTGCGGCGATTGCCTCCGACCCGAATTTTATTGCAGCGTTGGCGACGGCGATGACGTCGTTGATCGGAGGATCTCATCATCAAAAGGAGAATGGGAATGGGAATAGTAATGTTGATAACAATACAACTAGCAATTCCCAACAGTAA 1566 51.28 MDAAPSPPPPPPPPPPPPPPPPPPPPPPPPPSHRVLLDEMNFFPADDKSRVLLDSKLASRNRSPTKLDFNVNTGLNLLTTNSSSDQSMVDDGVSPNPEDKRAKNERAVLQAELERLKSENLRLKDMLNQVTSNYQALQMHLATLIQTQKAADVADPIEEKSVAAQEKVRHGGGCNTNKLVPRQFMDLGLATNADTDDLSMSSDGRSGEQSRSPVTTGEVASAKRHSPDQASNWSSNNNNKVPKLGSSSSSSSAKDVDQTESTMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLMNPNFLARTLLPCSSSMATISASAPFPTVTLDLTQTPNPLFQRPAAGHFPISFAATPPQSFPQIFGHALYNQSKFSGLQMSKDMEAPPPPPPALQNPLADTLSAASAAIASDPNFIAALATAMTSLIGGSHHQKENGNGNSNVDNNTTSNSQQ 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7706728 7708877 + Cp4.1LG15g07340.1 Cpe15g00738 482196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00738 521 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 29 518 IPR044810 GO:0003700
Cpe15g00738 521 ProSiteProfiles WRKY domain profile. 274 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00738 521 MobiDBLite consensus disorder prediction 195 219 - -
Cpe15g00738 521 MobiDBLite consensus disorder prediction 195 273 - -
Cpe15g00738 521 PANTHER OS05G0567200 PROTEIN 29 518 - -
Cpe15g00738 521 MobiDBLite consensus disorder prediction 79 103 - -
Cpe15g00738 521 MobiDBLite consensus disorder prediction 225 257 - -
Cpe15g00738 521 Pfam WRKY DNA -binding domain 281 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00738 521 MobiDBLite consensus disorder prediction 1 36 - -
Cpe15g00738 521 SUPERFAMILY WRKY DNA-binding domain 272 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe15g00738 521 MobiDBLite consensus disorder prediction 497 521 - -
Cpe15g00738 521 SMART WRKY_cls 279 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00738 521 Coils Coil 99 133 - -
Cpe15g00738 521 SUPERFAMILY Formin homology 2 domain (FH2 domain) 21 29 - -
Cpe15g00738 521 MobiDBLite consensus disorder prediction 1 34 - -
Cpe15g00738 521 Gene3D WRKY domain 264 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00720 Cpe15g00738 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00457 Cpe-Chr1:2637444 Cpe15g00738 Cpe-Chr15:7706728 4.93E-54 dispersed
Cpe14g00304 Cpe-Chr14:1787695 Cpe15g00738 Cpe-Chr15:7706728 1.71E-48 dispersed
Cpe15g00738 Cpe-Chr15:7706728 Cpe20g00199 Cpe-Chr20:1150014 1.00E-35 dispersed
Cpe10g00776 Cpe-Chr10:4413950 Cpe15g00738 Cpe-Chr15:7706728 6.90E-160 wgd
Cpe15g00738 Cpe-Chr15:7706728 Cpe19g00951 Cpe-Chr19:6777505 8.43E-144 wgd
Cpe15g00738 Cpe-Chr15:7706728 Cpe04g00720 Cpe-Chr4:7091741 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50644 PF03106 WRKY 2.30E-24 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00738 - - cpep:111811775 858.981