Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00739 ATGGCCTGGACCCGACTAGCTGCCGTCGGCCACGGCTCCTTCGCCACCGTCTACCTCGCTGCTTCCTCATCTTCCGGCGACCTTTTCGCTGTCAAGTCCGCCGAGCTTCTCAATTCGGACTTTCTTGAAACAGAGCAGAGGACTCTTTCTTCGCTGTCCCACCCTTCAATTGTGGGCTACAAGGGATTCGACGTAACGGCAGAAAATGGGAAGCTAATGTATAATCTCTTCATGGAGTACGCCGCTGGTGGCTCTCTCGCCGACGAAATCGTTCGGCGTGGGGGCCGGATTAAGGAGGTGACGGCGGCGTTTTACACGCGTCAAATTGTCAGAGGATTGGAGTACTTGCACAAACGGGGTTTGGTGCATTGTGATGTCAAAGCTAATAACATTTTAATCGGTGGAGATGGTTTAAAGATTGCTGATTTCGGATGCTCCAAATGGGTTCGTGAGTCGCCGGCAGCGATCTGCGGAACGCCGATGTTTATGGCACCGGAGGTAGCGCGTGGGGAAACACAGGGGATTTCCTCTGACATATGGGCACTCGGGTGTACATTAATCGAAATGGTATCCGGCGCTCCGCCGTGGCCTACCGCCGGAGACCCAGTTTCGACGCTGTACCGGATCGCATATTCCGGCGACTCACCGGAAATTCCGAGCTTTTTATCGGAGAAAGCGAAGGATTTTTTAGGGAAATGCTTGAGAAGAGACCCGACAGAACGGTGGAGTGCGAGTCAACTTCTTAAACATCCATTTTTGGGGGAACTGAGTTTTGGGTTCGAGATAACCAAGGAATTACATTCAGATTTCGAATCTCCGACGAGTATTTTGGATCAAGGCCCTTGGAACTCGTTAGAAGAAGGATTGCAAACTCTGTTGAAAACAGAGACATGGGAGGACGACAGAATCAAACGGCTGTCGATGTTTTCAGGGGAAATCAAATGGGAAATGAGAGATGATAATTGGATCACAATCAGAAGCTGTGTTAATGATGATAATTGA 1002 50.1 MAWTRLAAVGHGSFATVYLAASSSSGDLFAVKSAELLNSDFLETEQRTLSSLSHPSIVGYKGFDVTAENGKLMYNLFMEYAAGGSLADEIVRRGGRIKEVTAAFYTRQIVRGLEYLHKRGLVHCDVKANNILIGGDGLKIADFGCSKWVRESPAAICGTPMFMAPEVARGETQGISSDIWALGCTLIEMVSGAPPWPTAGDPVSTLYRIAYSGDSPEIPSFLSEKAKDFLGKCLRRDPTERWSASQLLKHPFLGELSFGFEITKELHSDFESPTSILDQGPWNSLEEGLQTLLKTETWEDDRIKRLSMFSGEIKWEMRDDNWITIRSCVNDDN 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7711421 7712422 + Cp4.1LG15g07300.1 Cpe15g00739 482197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00739 333 PANTHER MAP KINASE KINASE KINASE 1 328 - -
Cpe15g00739 333 CDD STKc_MAPKKK 3 253 - -
Cpe15g00739 333 Gene3D Transferase(Phosphotransferase) domain 1 2 309 - -
Cpe15g00739 333 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00739 333 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00739 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Cpe15g00739 333 SUPERFAMILY Protein kinase-like (PK-like) 4 260 IPR011009 -
Cpe15g00739 333 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 328 - -
Cpe15g00739 333 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Cpe15g00739 333 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00739 Cpe16g00429 CCT
Cpe05g01434 Cpe15g00739 CCT
Cpe05g01434 Cpe15g00739 ECH
Cpe15g00739 Cpe16g00429 ECH
Cpe04g00721 Cpe15g00739 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00739 Cpe-Chr15:7711421 Cpe19g00624 Cpe-Chr19:5093380 3.66E-69 dispersed
Cpe10g00777 Cpe-Chr10:4420219 Cpe15g00739 Cpe-Chr15:7711421 1.46E-105 wgd
Cpe15g00739 Cpe-Chr15:7711421 Cpe16g00429 Cpe-Chr16:5648554 9.59E-128 wgd
Cpe15g00739 Cpe-Chr15:7711421 Cpe19g00953 Cpe-Chr19:6785473 1.80E-114 wgd
Cpe15g00739 Cpe-Chr15:7711421 Cpe04g00721 Cpe-Chr4:7099314 0 wgd
Cpe15g00739 Cpe-Chr15:7711421 Cpe05g01434 Cpe-Chr5:10022802 1.64E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62866 PF00069 Pkinase 1.60E-58 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00739 K20716 - csv:101205351 534.643