Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00750 ATGCCAGCCGGAATGATGATTCCAGCTAGAAACACGGCGCCGATGATCGGAAGGAATGGAAGTGTTGGGATTTTTGGGTCTCCGGCGAGTCTTCTTCTTGGTCAGGGGAGTATAATGGAGGGAGGAGGGCAGGTAGAGGGAGTGGAGTTTTCAGAGAGCGATTTTGGGAGAATGAGAGAAGGAGAAGAGTTTGAGAGTGCAACAAAATCAAGCAGCGAGAACCAGGAGGTGGGTTCTGGTGATGACCTTGACCATCAACCACCCAAAAAGAAGCGTTACCACCGCCATACTCAGAACCAGATCCAACAAATGGAGGCGTTCTTCAAGGAATGTCCTCACCCAGATGATAAGCAGAGGAAGGAGCTGAGTAGGGAGTTGGGTTTGGAGCCGTTGCAAGTCAAGTTTTGGTTCCAAAACAAGAGAACCCAGATGAAGACCCATCATGAGCGACATGAGAACACCCAGCTCCGAACAGAAAATGAGAAGCTTCGAGCTGATAATATGAGGTACAGAGAAGCCCTCGGTAATGCTACGTGTCCTAATTGTGGAGGCCCCACCGCCATTGGAGAGATGTCCTTTGACGAACATCATCTCAGGCTTGAAAACGCCCGCTTGAGAGAAGAGATCGATCGCATCTCAGCCATAGCAGCAAAATACGTAGGAAAGCCAGTATCGAGCTACCCGCTTCTTTCCACGCCAATGACATCAAGTCCTCTAGAACTTGGAATTGGAAGCTATGGCGGCCACAATTCAGGCCTCGGAGCTGGTGGTGGGGACATGTATGGGGCGGTGGACCTTTTGAGGACTATAAGCGCGCCATCGGAGGCTGACAAGCCCATAATCATCGAGCTTGCAGTTGCAGCCATGGAGGAGCTGGTTCGAATGGCTCAGATGGGTGAGCCCTTGTGGATGACTTCCCTCGATGGCTCCACGGCTGTACTTAATGAAGATGAATACGTTAGAACCTTCCCTAGAGGAATTGGACCTAAGCCCTCTGGGTTTAGCTGTGAAGCTTCTCGTGCCACTGCTGTTGTCATTATGAACCATATTAGCCTCGTTGAGATGCTCATGGATGTGAATCAGTGGTCAACCGTATTCAGTGGGATTGTGTCAAGAGCTATGACATTAGAAGTATTGTCAACCGGCGTTGCCGGAAACTACAACGGAGCATTACAAGTGGTTACGTGGGTTGAGCATGTTGAGGTGGATGATCGTGGGGTGCATAGTTTGTACAACCAGCTAGTTAGGTCTGGCCACGCGTTCGGTGCTAAGCGTTGGATTGCGACGTTGGATCGTCAGTGTGAAAGGCTGGCCAGCGCTATGGCCACAAGTATTCCTACCGGTGATGCTGGTGTGATAACCAATCAAGAAGGAAGAAAGAGCATGTTGAAGCTAGCAGAGAGAATGGTGATGAGCTTTTGCGGCGGAGTGAGCGCGTCCACCACACACACATGGACAACTCTGTCAGGAACTGGGGCGGATGATGTTCGAGTTATGACTAGAAAGAGTGTTGACGATCCCGGCAGACCACCCGGGATTGTCCTCAGCGCCGCCACTTCATTTTGGCTTCCTTGGGATATTCTTTCGAACGGTGGAATTGTGCAAGAAATGGCTCACATTGCGAATGGTCGCGACACAGGAAACTGTGTTTCATTGCTACGAGTAAACAGCGCAAATTCAAGCCAAAGCAACATGTTGATATTACAAGAGAGCAGCACAGATCAAACAGCCTCGTTTGTGGTGTATGCGCCGGTGGACATTGTGGCCATCAACGTGGTGCTAAACGGTGGAGATCCCGATTATGTCGCCCTTCTCCCGTCTGGATTTGCCATTCTTCCCGACGGAAGCACCACGTCGGACGGCGGCGCTAATGGCGTGGCGGAACATGGGTCGGGCGGGTCGCTTTTAACAGTTGCATTTCAGATTTTGGTGGACTCGGTTCCGACAGCTAAACTTTCTCTTGGGTCAGTCGCAACAGTCAACAATCTGATTGCCTGTACCGTTGAGAGGATCAAAGCCTCTTTGTCATGCGAGAATCAGTGA 2043 50.71 MPAGMMIPARNTAPMIGRNGSVGIFGSPASLLLGQGSIMEGGGQVEGVEFSESDFGRMREGEEFESATKSSSENQEVGSGDDLDHQPPKKKRYHRHTQNQIQQMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTHHERHENTQLRTENEKLRADNMRYREALGNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVSSYPLLSTPMTSSPLELGIGSYGGHNSGLGAGGGDMYGAVDLLRTISAPSEADKPIIIELAVAAMEELVRMAQMGEPLWMTSLDGSTAVLNEDEYVRTFPRGIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVVTWVEHVEVDDRGVHSLYNQLVRSGHAFGAKRWIATLDRQCERLASAMATSIPTGDAGVITNQEGRKSMLKLAERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPWDILSNGGIVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESSTDQTASFVVYAPVDIVAINVVLNGGDPDYVALLPSGFAILPDGSTTSDGGANGVAEHGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCENQ 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7784636 7789351 + Cp4.1LG15g07490.1 Cpe15g00750 482208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00750 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 394 677 IPR042160 -
Cpe15g00750 680 SMART START_1 283 436 IPR002913 GO:0008289
Cpe15g00750 680 SMART HOX_1 88 151 IPR001356 GO:0003677
Cpe15g00750 680 CDD START_ArGLABRA2_like 278 435 - -
Cpe15g00750 680 Pfam START domain 394 436 IPR002913 GO:0008289
Cpe15g00750 680 Pfam START domain 284 391 IPR002913 GO:0008289
Cpe15g00750 680 ProSiteProfiles START domain profile. 394 439 IPR002913 GO:0008289
Cpe15g00750 680 Pfam Homeodomain 90 145 IPR001356 GO:0003677
Cpe15g00750 680 SUPERFAMILY Bet v1-like 276 382 - -
Cpe15g00750 680 CDD homeodomain 90 148 IPR001356 GO:0003677
Cpe15g00750 680 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Cpe15g00750 680 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 54 395 - -
Cpe15g00750 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 54 395 IPR042160 -
Cpe15g00750 680 ProSiteProfiles START domain profile. 274 382 IPR002913 GO:0008289
Cpe15g00750 680 Gene3D - 76 164 - -
Cpe15g00750 680 MobiDBLite consensus disorder prediction 52 69 - -
Cpe15g00750 680 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 394 677 - -
Cpe15g00750 680 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Cpe15g00750 680 SUPERFAMILY Homeodomain-like 78 146 IPR009057 -
Cpe15g00750 680 MobiDBLite consensus disorder prediction 51 98 - -
Cpe15g00750 680 SUPERFAMILY Bet v1-like 455 672 - -
Cpe15g00750 680 Coils Coil 153 173 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00750 Cpe16g00448 CCT
Cpe05g01445 Cpe15g00750 CCT
Cpe15g00750 Cpe16g00448 ECH
Cpe05g01445 Cpe15g00750 ECH
Cpe04g00733 Cpe15g00750 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00749 Cpe-Chr3:4599107 Cpe15g00750 Cpe-Chr15:7784636 3.28E-109 dispersed
Cpe03g01104 Cpe-Chr3:9115844 Cpe15g00750 Cpe-Chr15:7784636 1.28E-40 dispersed
Cpe14g00118 Cpe-Chr14:638199 Cpe15g00750 Cpe-Chr15:7784636 6.70E-107 dispersed
Cpe10g00792 Cpe-Chr10:4503487 Cpe15g00750 Cpe-Chr15:7784636 7.00E-72 wgd
Cpe15g00750 Cpe-Chr15:7784636 Cpe16g00448 Cpe-Chr16:5744649 2.47E-51 wgd
Cpe15g00750 Cpe-Chr15:7784636 Cpe19g00972 Cpe-Chr19:6850520 0 wgd
Cpe15g00750 Cpe-Chr15:7784636 Cpe02g00755 Cpe-Chr2:4827195 2.49E-16 wgd
Cpe15g00750 Cpe-Chr15:7784636 Cpe20g00379 Cpe-Chr20:2136801 6.98E-137 wgd
Cpe15g00750 Cpe-Chr15:7784636 Cpe04g00733 Cpe-Chr4:7208678 3.56E-11 wgd
Cpe15g00750 Cpe-Chr15:7784636 Cpe05g01445 Cpe-Chr5:10078047 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50646 PF01852 START 1.40E-13 CL0209 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00750 K09338 - qsu:112016283 738.413