Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe15g00750 | ATGCCAGCCGGAATGATGATTCCAGCTAGAAACACGGCGCCGATGATCGGAAGGAATGGAAGTGTTGGGATTTTTGGGTCTCCGGCGAGTCTTCTTCTTGGTCAGGGGAGTATAATGGAGGGAGGAGGGCAGGTAGAGGGAGTGGAGTTTTCAGAGAGCGATTTTGGGAGAATGAGAGAAGGAGAAGAGTTTGAGAGTGCAACAAAATCAAGCAGCGAGAACCAGGAGGTGGGTTCTGGTGATGACCTTGACCATCAACCACCCAAAAAGAAGCGTTACCACCGCCATACTCAGAACCAGATCCAACAAATGGAGGCGTTCTTCAAGGAATGTCCTCACCCAGATGATAAGCAGAGGAAGGAGCTGAGTAGGGAGTTGGGTTTGGAGCCGTTGCAAGTCAAGTTTTGGTTCCAAAACAAGAGAACCCAGATGAAGACCCATCATGAGCGACATGAGAACACCCAGCTCCGAACAGAAAATGAGAAGCTTCGAGCTGATAATATGAGGTACAGAGAAGCCCTCGGTAATGCTACGTGTCCTAATTGTGGAGGCCCCACCGCCATTGGAGAGATGTCCTTTGACGAACATCATCTCAGGCTTGAAAACGCCCGCTTGAGAGAAGAGATCGATCGCATCTCAGCCATAGCAGCAAAATACGTAGGAAAGCCAGTATCGAGCTACCCGCTTCTTTCCACGCCAATGACATCAAGTCCTCTAGAACTTGGAATTGGAAGCTATGGCGGCCACAATTCAGGCCTCGGAGCTGGTGGTGGGGACATGTATGGGGCGGTGGACCTTTTGAGGACTATAAGCGCGCCATCGGAGGCTGACAAGCCCATAATCATCGAGCTTGCAGTTGCAGCCATGGAGGAGCTGGTTCGAATGGCTCAGATGGGTGAGCCCTTGTGGATGACTTCCCTCGATGGCTCCACGGCTGTACTTAATGAAGATGAATACGTTAGAACCTTCCCTAGAGGAATTGGACCTAAGCCCTCTGGGTTTAGCTGTGAAGCTTCTCGTGCCACTGCTGTTGTCATTATGAACCATATTAGCCTCGTTGAGATGCTCATGGATGTGAATCAGTGGTCAACCGTATTCAGTGGGATTGTGTCAAGAGCTATGACATTAGAAGTATTGTCAACCGGCGTTGCCGGAAACTACAACGGAGCATTACAAGTGGTTACGTGGGTTGAGCATGTTGAGGTGGATGATCGTGGGGTGCATAGTTTGTACAACCAGCTAGTTAGGTCTGGCCACGCGTTCGGTGCTAAGCGTTGGATTGCGACGTTGGATCGTCAGTGTGAAAGGCTGGCCAGCGCTATGGCCACAAGTATTCCTACCGGTGATGCTGGTGTGATAACCAATCAAGAAGGAAGAAAGAGCATGTTGAAGCTAGCAGAGAGAATGGTGATGAGCTTTTGCGGCGGAGTGAGCGCGTCCACCACACACACATGGACAACTCTGTCAGGAACTGGGGCGGATGATGTTCGAGTTATGACTAGAAAGAGTGTTGACGATCCCGGCAGACCACCCGGGATTGTCCTCAGCGCCGCCACTTCATTTTGGCTTCCTTGGGATATTCTTTCGAACGGTGGAATTGTGCAAGAAATGGCTCACATTGCGAATGGTCGCGACACAGGAAACTGTGTTTCATTGCTACGAGTAAACAGCGCAAATTCAAGCCAAAGCAACATGTTGATATTACAAGAGAGCAGCACAGATCAAACAGCCTCGTTTGTGGTGTATGCGCCGGTGGACATTGTGGCCATCAACGTGGTGCTAAACGGTGGAGATCCCGATTATGTCGCCCTTCTCCCGTCTGGATTTGCCATTCTTCCCGACGGAAGCACCACGTCGGACGGCGGCGCTAATGGCGTGGCGGAACATGGGTCGGGCGGGTCGCTTTTAACAGTTGCATTTCAGATTTTGGTGGACTCGGTTCCGACAGCTAAACTTTCTCTTGGGTCAGTCGCAACAGTCAACAATCTGATTGCCTGTACCGTTGAGAGGATCAAAGCCTCTTTGTCATGCGAGAATCAGTGA | 2043 | 50.71 | MPAGMMIPARNTAPMIGRNGSVGIFGSPASLLLGQGSIMEGGGQVEGVEFSESDFGRMREGEEFESATKSSSENQEVGSGDDLDHQPPKKKRYHRHTQNQIQQMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTHHERHENTQLRTENEKLRADNMRYREALGNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVSSYPLLSTPMTSSPLELGIGSYGGHNSGLGAGGGDMYGAVDLLRTISAPSEADKPIIIELAVAAMEELVRMAQMGEPLWMTSLDGSTAVLNEDEYVRTFPRGIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVVTWVEHVEVDDRGVHSLYNQLVRSGHAFGAKRWIATLDRQCERLASAMATSIPTGDAGVITNQEGRKSMLKLAERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPWDILSNGGIVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESSTDQTASFVVYAPVDIVAINVVLNGGDPDYVALLPSGFAILPDGSTTSDGGANGVAEHGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCENQ | 680 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 7784636 | 7789351 | + | Cp4.1LG15g07490.1 | Cpe15g00750 | 482208 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe15g00750 | 680 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 394 | 677 | IPR042160 | - | |
Cpe15g00750 | 680 | SMART | START_1 | 283 | 436 | IPR002913 | GO:0008289 | |
Cpe15g00750 | 680 | SMART | HOX_1 | 88 | 151 | IPR001356 | GO:0003677 | |
Cpe15g00750 | 680 | CDD | START_ArGLABRA2_like | 278 | 435 | - | - | |
Cpe15g00750 | 680 | Pfam | START domain | 394 | 436 | IPR002913 | GO:0008289 | |
Cpe15g00750 | 680 | Pfam | START domain | 284 | 391 | IPR002913 | GO:0008289 | |
Cpe15g00750 | 680 | ProSiteProfiles | START domain profile. | 394 | 439 | IPR002913 | GO:0008289 | |
Cpe15g00750 | 680 | Pfam | Homeodomain | 90 | 145 | IPR001356 | GO:0003677 | |
Cpe15g00750 | 680 | SUPERFAMILY | Bet v1-like | 276 | 382 | - | - | |
Cpe15g00750 | 680 | CDD | homeodomain | 90 | 148 | IPR001356 | GO:0003677 | |
Cpe15g00750 | 680 | ProSiteProfiles | 'Homeobox' domain profile. | 87 | 147 | IPR001356 | GO:0003677 | |
Cpe15g00750 | 680 | PANTHER | HOMEOBOX LEUCINE ZIPPER PROTEIN | 54 | 395 | - | - | |
Cpe15g00750 | 680 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 54 | 395 | IPR042160 | - | |
Cpe15g00750 | 680 | ProSiteProfiles | START domain profile. | 274 | 382 | IPR002913 | GO:0008289 | |
Cpe15g00750 | 680 | Gene3D | - | 76 | 164 | - | - | |
Cpe15g00750 | 680 | MobiDBLite | consensus disorder prediction | 52 | 69 | - | - | |
Cpe15g00750 | 680 | PANTHER | HOMEOBOX LEUCINE ZIPPER PROTEIN | 394 | 677 | - | - | |
Cpe15g00750 | 680 | ProSitePatterns | 'Homeobox' domain signature. | 122 | 145 | IPR017970 | GO:0000981|GO:0006355 | |
Cpe15g00750 | 680 | SUPERFAMILY | Homeodomain-like | 78 | 146 | IPR009057 | - | |
Cpe15g00750 | 680 | MobiDBLite | consensus disorder prediction | 51 | 98 | - | - | |
Cpe15g00750 | 680 | SUPERFAMILY | Bet v1-like | 455 | 672 | - | - | |
Cpe15g00750 | 680 | Coils | Coil | 153 | 173 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe15g00750 | Cpe16g00448 | CCT | |
Cpe05g01445 | Cpe15g00750 | CCT | |
Cpe15g00750 | Cpe16g00448 | ECH | |
Cpe05g01445 | Cpe15g00750 | ECH | |
Cpe04g00733 | Cpe15g00750 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00749 | Cpe-Chr3:4599107 | Cpe15g00750 | Cpe-Chr15:7784636 | 3.28E-109 | dispersed | |
Cpe03g01104 | Cpe-Chr3:9115844 | Cpe15g00750 | Cpe-Chr15:7784636 | 1.28E-40 | dispersed | |
Cpe14g00118 | Cpe-Chr14:638199 | Cpe15g00750 | Cpe-Chr15:7784636 | 6.70E-107 | dispersed | |
Cpe10g00792 | Cpe-Chr10:4503487 | Cpe15g00750 | Cpe-Chr15:7784636 | 7.00E-72 | wgd | |
Cpe15g00750 | Cpe-Chr15:7784636 | Cpe16g00448 | Cpe-Chr16:5744649 | 2.47E-51 | wgd | |
Cpe15g00750 | Cpe-Chr15:7784636 | Cpe19g00972 | Cpe-Chr19:6850520 | 0 | wgd | |
Cpe15g00750 | Cpe-Chr15:7784636 | Cpe02g00755 | Cpe-Chr2:4827195 | 2.49E-16 | wgd | |
Cpe15g00750 | Cpe-Chr15:7784636 | Cpe20g00379 | Cpe-Chr20:2136801 | 6.98E-137 | wgd | |
Cpe15g00750 | Cpe-Chr15:7784636 | Cpe04g00733 | Cpe-Chr4:7208678 | 3.56E-11 | wgd | |
Cpe15g00750 | Cpe-Chr15:7784636 | Cpe05g01445 | Cpe-Chr5:10078047 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50646 | PF01852 | START | 1.40E-13 | CL0209 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe15g00750 | K09338 | - | qsu:112016283 | 738.413 |