Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00751 ATGGTCCTAAACTCCGTTCCACGCAATAATCCAGACCCATTTGCTGATGCAAATGCTGAGGACTCGGGAGCCGGGGGAAAAGAGTATGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGTCTGACTACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTGGGCCAGCATCCGTTTGTTTTCTGCGTACAAGATGATTTCCATTTAATTTTAAGAAATGAAGGGTTTAGATATGCTTTAGGTTATGAAGACATGATTGACCCATTTGCTGATGCAAATGCTGAGGACTCGGGAGCCGGGGGAAAAGAGTATGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGTCTGACTACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTGGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATTCACGGATTTTAA 636 43.08 MVLNSVPRNNPDPFADANAEDSGAGGKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQHPFVFCVQDDFHLILRNEGFRYALGYEDMIDPFADANAEDSGAGGKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7791911 7796678 - Cp4.1LG15g07650.1 Cpe15g00751 482209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00751 211 SUPERFAMILY eIF1-like 7 80 IPR036877 GO:0003743|GO:0006413
Cpe15g00751 211 Gene3D - 96 211 - -
Cpe15g00751 211 Gene3D - 3 93 - -
Cpe15g00751 211 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 109 211 IPR005874 GO:0003743
Cpe15g00751 211 MobiDBLite consensus disorder prediction 1 23 - -
Cpe15g00751 211 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 90 IPR001950 GO:0003743|GO:0006413
Cpe15g00751 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 110 211 - -
Cpe15g00751 211 Pfam Translation initiation factor SUI1 126 200 IPR001950 GO:0003743|GO:0006413
Cpe15g00751 211 Pfam Translation initiation factor SUI1 27 77 IPR001950 GO:0003743|GO:0006413
Cpe15g00751 211 ProSiteProfiles Translation initiation factor SUI1 family profile. 129 199 IPR001950 GO:0003743|GO:0006413
Cpe15g00751 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 11 80 - -
Cpe15g00751 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 11 80 - -
Cpe15g00751 211 CDD eIF1_SUI1 127 210 IPR005874 GO:0003743
Cpe15g00751 211 SUPERFAMILY eIF1-like 106 211 IPR036877 GO:0003743|GO:0006413
Cpe15g00751 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 110 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00773 Cpe-Chr2:4921219 Cpe15g00751 Cpe-Chr15:7791911 1.18E-87 dispersed
Cpe15g00751 Cpe-Chr15:7791911 Cpe15g00752 Cpe-Chr15:7797833 1.89E-44 tandem
Cpe15g00751 Cpe-Chr15:7791911 Cpe04g00735 Cpe-Chr4:7219091 1.89E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00751 K03113 - csv:101219651 203.756