Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00752 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCTAAAGAGTACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGACAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTATCCACCTTCCTTGTGCAGGCTGGCATCGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTGA 342 44.74 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7797833 7800291 - Cp4.1LG15g07640.1 Cpe15g00752 482210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00752 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cpe15g00752 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Cpe15g00752 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Cpe15g00752 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Cpe15g00752 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Cpe15g00752 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cpe15g00752 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Cpe15g00752 113 Gene3D - 1 113 - -
Cpe15g00752 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00735 Cpe15g00752 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00735 Cpe-Chr4:7219091 Cpe15g00752 Cpe-Chr15:7797833 2.33E-81 dispersed
Cpe04g00736 Cpe-Chr4:7222585 Cpe15g00752 Cpe-Chr15:7797833 7.21E-81 dispersed
Cpe06g00771 Cpe-Chr6:4865024 Cpe15g00752 Cpe-Chr15:7797833 1.44E-59 dispersed
Cpe15g00751 Cpe-Chr15:7791911 Cpe15g00752 Cpe-Chr15:7797833 1.89E-44 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00752 K03113 - csv:101219651 228.409