Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00772 ATGGATGAAGGAAATAGAGGAGAGGGAACATGTTTATTACATAGCAGAAGTGGTGAATTGGTAGCCAAAAGAAGAAGTGTCAAGAACTTGGTCATCAGCAGCTGGTTTGCAGAGGAGTTGATGTCTTATTTTCTTTTGTACTCATTTGTGTTCTTAATTTCTGTCGTTAATTGTTTTGCTAAAGATATCTTAGAGTTTAAGAGTTGCATAACTGATGAGCGAGGGGATACTCTTGTATCCGCAGGATCCAGATTCGAACTTGGATTTTTTACGCCGTATGGCAGCTCTGATGGCAGAAGATACTTGGGAATATGGTATTACAAATCAAATCCAAGTACGGTTGTTTGGGTTGCCAATCGAGACAGGCCACTTGCTGGTTCAGATGGTGTCTTTATGATTGAGGATGATGGCAACCTCAAAGTATATAATGGAAATCAGAATGTTTATTGGTCAACAAACATTGGAAGTTCTGTACTCGATCACAGGACCCTGAAGCTAATGGATAATGGAAATCTGGTTTTGAGCTATGTAGATCAGGAAGACTTGTCTGAGCACATCCTCTGGCAGAGTTTTGATTACCCAACTGATACATTTCTTCCTGGCATGGTAATGGATGATAACTTAGTGCTGACTTCATGGAAGAGCTATGATGATCCGGCTCAAGGGAACTTCACTTTTCAGCTAGATCAAGATGGAAGTCAATATGTCATTTGGAAGAGATCAGTTAAATACTGGAAAAGTGGAGTTTCAGGTAAGTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCCGTGCCACATCTTACATCATCATTGTATAGTGATACAAGGTTAGTATTGAACAGCACAGGTCAGCTTCTATATCTAAACTGGGATGATCACAAAGTTTGGTCTCAGATTTGGGTAGAGCCGAGGGATAGATGCAGTGTGTATAATGCGTGTGGCGATTTTGCTAGCTGTAATAGTGAGGGTGGTATGGCTTGCAAATGCCTGCCTGGTTTTGAGCCCACCTCTCTAGAGAGTTGGAATCTTGGAGATTATTCTGGTGGATGCATCAGGAAATCACCAATATGCAGTGTCGACAATGAAAGTGACACTTTTTTGAGTCTAAAGATGATGAAAGCTGGAAACCCAGACTTCCAGTTTAATGCAAAGGATGTCTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCGGTGTCAGGCTTACTCATATTTTGAAGCTAATATCACTGGACAGGGTGGGATTGATAATTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAATTTGATAATGGCCGTGACCTCAACGTTCGAGTAGCAGTTCGAGATCTAGAGTTGACTGTCAGAAATTGTGGAACATGTGGCACAAACCTCATTCCTTATCCGCTTAGCACAGGACCTGAATGTGGTGACCCAATGTACTTCAATTTTAACTGCAATGTGGCTACTGGCCAGGTTAACTTTGAAGCAGCAGGTGGAACGTACAAGGTTAAATTCATTGATTCAGAAGCGCGGAAATTTATCATTCAAACCAAGGAAGCTGGTGATTGTGGTGATAAAAATTGGATAAACAAAGCCCTTCAGCTGAACCAGTCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCAGAGATTTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCGGTTGGGAGCCTCCATTAGAGCCAACTTGTTCTTCAACTACAGACTGCAAAGACTGGCCTTACTCAACTTGCAACATGAGTAAAGATGGAAAGAAAAGATGCCTTTGCATTACAAACTTCCATTGGAACGGCTGGAGCTTGAATTGCACTACAGATCACAACAAAGAAAAGGATGGAAGAGGCAAAACGAGCTTCTCTGTGATTATTGTTGCAACAACCATATGTATAGTCCTTCTGATTATTCTCTCATGTACTGTGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAAGAAAGCAGGGGAAACAGCCAAAAAGATCTAATACTTCACTTGTATGACAACGAGAGACGTGTCAAAGACATGATTGAATCGGGTCGGTTCAAGGAAGATGATACAAATGGAATAGACATTCCATTTTTTGATTTGGAAACAATTCTAATTGCGACAGGGAATTTCTCAAATGCAAATAAGCTTGGACAGGGAGGTTTTGGGCCAGTTTACAAGGGCAAGTTTCCTAGTGGGCAAGAGATTGCTGTAAAGAGGCTCTCGAGAGGTTCAGGACAAGGCTTTGAGGAGTTTAAGAACGAGGTTTTATTAATTGCGAAACTTCAGCATCGAAATCTCGTTAGACTTTTGGGCTACTGTGTTGAAGGAGATGAAAAGATGTTGCTTTATGAATACATGCCAAACAAAAGCTTAGACGCCTTTATATTCGATCAAAAGCTGAGTGTGGCATTGGATTGGGACGTGCGCTTCAATGTCATTTTGGGAATCGCTCGTGGCCTTCTTTATCTACATCAAGATTCGAGGTTGAGGATTATTCATAGAGATTTGAAGACGAGCAACATTCTTCTAGATGAGGAGATGAATCCCAAAATATCTGACTTTGGCTTGGCGAGGATATTTGGAGGGAAAGAAACTGCGACGAATACCAGAAGGGTGGTAGGGACTTATGGTTACATGTCACCGGAATACGCATTGGACGGCATATTTTCTGTAAAATCTGATGTCTTTAGCTTCGGTGTAGTCGTAGTCGAGATCATTAGTGGAAAAAGGAACACAGGATTCTATCACTCAGAGAAAGCTTTGAGTCTTCTAGGCTATGCTTGGGATTTATGGATGAAAGACGAAGGCTTGGAATTAATGGAGCCAACACTGAGTGAGAATTGCAAAAGAGAAGAATATTTGAAATGTTTAAACGTGGGGCTGTTGTGCGTGCAGGAAGATCCATGGGATCGACCCACCATGTCAAATGTGGTCTTCATGCTCGGCAGCGAAACCGCAACTCTTCCATCCCCGAAACCACCGGCATTCGTCGTGCGGCGGTGCCCCTCAAGCAGAGCTTCTTCCTCCACCAAACCAGAAACTTTCTCCCATAATGAGTTGACAGTCACCTTACAAGAAGGTAGATAG 3168 41.82 MDEGNRGEGTCLLHSRSGELVAKRRSVKNLVISSWFAEELMSYFLLYSFVFLISVVNCFAKDILEFKSCITDERGDTLVSAGSRFELGFFTPYGSSDGRRYLGIWYYKSNPSTVVWVANRDRPLAGSDGVFMIEDDGNLKVYNGNQNVYWSTNIGSSVLDHRTLKLMDNGNLVLSYVDQEDLSEHILWQSFDYPTDTFLPGMVMDDNLVLTSWKSYDDPAQGNFTFQLDQDGSQYVIWKRSVKYWKSGVSGKFITTDKMPAALLYLLSNFSSKTVPNFSVPHLTSSLYSDTRLVLNSTGQLLYLNWDDHKVWSQIWVEPRDRCSVYNACGDFASCNSEGGMACKCLPGFEPTSLESWNLGDYSGGCIRKSPICSVDNESDTFLSLKMMKAGNPDFQFNAKDVFDCKLECLNNCRCQAYSYFEANITGQGGIDNSACWIWSGDLNNLQDEFDNGRDLNVRVAVRDLELTVRNCGTCGTNLIPYPLSTGPECGDPMYFNFNCNVATGQVNFEAAGGTYKVKFIDSEARKFIIQTKEAGDCGDKNWINKALQLNQSSPFHVTSWCNFKETNPEIFSLKTSNEVEIGWEPPLEPTCSSTTDCKDWPYSTCNMSKDGKKRCLCITNFHWNGWSLNCTTDHNKEKDGRGKTSFSVIIVATTICIVLLIILSCTVFYIYFSKTGLIERQESRGNSQKDLILHLYDNERRVKDMIESGRFKEDDTNGIDIPFFDLETILIATGNFSNANKLGQGGFGPVYKGKFPSGQEIAVKRLSRGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKLSVALDWDVRFNVILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETATNTRRVVGTYGYMSPEYALDGIFSVKSDVFSFGVVVVEIISGKRNTGFYHSEKALSLLGYAWDLWMKDEGLELMEPTLSENCKREEYLKCLNVGLLCVQEDPWDRPTMSNVVFMLGSETATLPSPKPPAFVVRRCPSSRASSSTKPETFSHNELTVTLQEGR 1055
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7885245 7889425 - Cp4.1LG15g07830.1 Cpe15g00772 482230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00772 1055 Gene3D Transferase(Phosphotransferase) domain 1 813 1015 - -
Cpe15g00772 1055 ProSiteProfiles PAN/Apple domain profile. 373 461 IPR003609 -
Cpe15g00772 1055 SUPERFAMILY alpha-D-mannose-specific plant lectins 114 219 IPR036426 -
Cpe15g00772 1055 CDD PAN_AP_plant 373 461 - -
Cpe15g00772 1055 Pfam D-mannose binding lectin 113 208 IPR001480 -
Cpe15g00772 1055 MobiDBLite consensus disorder prediction 1030 1055 - -
Cpe15g00772 1055 Pfam Protein tyrosine and serine/threonine kinase 740 1006 IPR001245 GO:0004672|GO:0006468
Cpe15g00772 1055 Pfam Domain of unknown function (DUF3403) 1010 1055 IPR021820 GO:0004674
Cpe15g00772 1055 Gene3D Phosphorylase Kinase; domain 1 700 812 - -
Cpe15g00772 1055 SMART serkin_6 737 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00772 1055 Gene3D - 62 191 IPR036426 -
Cpe15g00772 1055 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 59 1052 - -
Cpe15g00772 1055 SUPERFAMILY Protein kinase-like (PK-like) 721 1038 IPR011009 -
Cpe15g00772 1055 ProSitePatterns Serine/Threonine protein kinases active-site signature. 858 870 IPR008271 GO:0004672|GO:0006468
Cpe15g00772 1055 CDD STKc_IRAK 743 1008 - -
Cpe15g00772 1055 ProSiteProfiles Protein kinase domain profile. 737 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00772 1055 ProSiteProfiles Bulb-type lectin domain profile. 63 187 IPR001480 -
Cpe15g00772 1055 SMART ntp_6 377 460 IPR003609 -
Cpe15g00772 1055 Pfam PAN-like domain 373 445 IPR003609 -
Cpe15g00772 1055 SMART blect_4 71 194 IPR001480 -
Cpe15g00772 1055 CDD B_lectin 75 194 IPR001480 -
Cpe15g00772 1055 Pfam S-locus glycoprotein domain 245 352 IPR000858 GO:0048544
Cpe15g00772 1055 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 59 1052 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00772 Cpe-Chr15:7885245 Cpe15g00892 Cpe-Chr15:8578801 5.09E-80 dispersed
Cpe17g00589 Cpe-Chr17:4880840 Cpe15g00772 Cpe-Chr15:7885245 1.63E-16 transposed
Cpe20g00125 Cpe-Chr20:694365 Cpe15g00772 Cpe-Chr15:7885245 7.36E-75 transposed
Cpe10g00810 Cpe-Chr10:4590262 Cpe15g00772 Cpe-Chr15:7885245 2.38E-35 wgd
Cpe15g00772 Cpe-Chr15:7885245 Cpe16g00466 Cpe-Chr16:5822759 4.02E-86 wgd
Cpe15g00772 Cpe-Chr15:7885245 Cpe19g00983 Cpe-Chr19:6910868 3.37E-63 wgd
Cpe15g00772 Cpe-Chr15:7885245 Cpe20g00398 Cpe-Chr20:2246374 6.25E-11 wgd
Cpe15g00772 Cpe-Chr15:7885245 Cpe09g00875 Cpe-Chr9:8015940 2.35E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62867 PF07714 PK_Tyr_Ser-Thr 2.70E-45 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00772 - - csv:101217751 1996.86