Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00785 ATGAGATTTTTCTCCTTCTTCACTAGAGCTTCGAGAGCTTTTCATGGCTCCCCTACATACTCAAAGCTTCTGGTCATCAGCACCCTCAGTAGCGGAGGTCTATTGGCATATGCAGATTCACAATCAGACGCTAGCAGTCCTATTGAGGAGTGCCCAAAAAAGAGAGTTCTGGTGCTTGGAACAGGATGGGCCGGTACCAGTTTCCTCAAGGATCTGGATGCATCGAAATATGATGTTCAGGTTGTTTCGCCTCAGAATTATTTCTCATTTACTCCTTTATTGCCTAGCGTTACATGTGGAACAGTTGAAGCACGGAGCATTGTCGAACCTGTTCGAAACATCATGAAGAAGAGAAAAGGTGAAGTTAAATTCTGGGAAGCTGAATGCACTAAGATTGATGCTGCAAACAAAAAGGTTTTCTGCCGGTCATTAGTTGACAATAACTTGGTTGGAAATAGGGAGTTTGCTTTAGAATATGACTATTTGGTAATAGCAATGGGAGCGCAAGTTAATACTTTTAATACTCCTGGTGTCAAGGAGAACTGCCATTTTCTCAAGGAAGTGCAAGATGCTCAGAAGATCCGCAAAAGTGTGATAGATTGCTTTGAAATGGCTGTGATTCCTAGTCTAAGTGACGAAGAGCGAAGGAGAAATCTTCATTTCGTTATTGTTGGAGGGGGTCCCACCGGGGTTGAATTTGCTGCCGAGCTTCACGACTTCTTTAAAGAAGATTTGGTTTATTTATATCCTACGGTTAAAGATCTGGTGAAAATTTCAGTGATTCAATCAGGAGATCACATCTTGAATGCGTTTGATGAAAGAATTAGTTCATTTGCCGAACAAAAATTCCAAAGAGATGGTATTGATGTGCACACAGGATGTCGAGTTATCAGTGTATCTGATAAGGAAATTAAGATGAAGGTGAAATCATCTGGAGAAGTCTGTTCAATACCGCATGGATTAATTGTGTGGTCTACAGGCATCATGACTCGTCCTGTTGTGAAGGATTTCATGGAGCAAATTGGCCAGGGTAGTAGACGCATTCTAACCACTGATGAATGGCTTCGAGTGAAGGGCACTCAAAATGTGTATGCCATTGGTGATTGTGCTACAATTGACCAACGCAAAATTATGAAAGATATTGCCGCCATATTTGAAGCTGCAGACAAAGATAACTCTGGAACCCTGACAGTTACAGAATTTCAAGATGTTATAGATGATATCCTCATTAGGTATCCTCAAGTAGAAATATATTTGAGGAGCAAACATCTACGTGATGTAAAAGATCTATTGAAAGATTCTCAGGGACATGAGGACGAAGTAGATATTGAAGGATTTAAGTCGGCTCTTTCTCATGCTGACACGCAGATGAAAAATCTACCAGCTACTGCACAGGTTGCTGCCCAACAAGGTGCGTATCTTAGCAGGTGCTTCAACCGTAGGGAGCAGTGCACTGAGAACCCTGAAGGCCCTCGACGTTTTAAGAGTTCTGGACGTTATCAGTTTCTTCCATTCCGGTACAAGCACTTGGGACAGTTCGCTCCTTTAGGGGGAGAACAGGCCGCTGCAGAACTCCCTGGAGACTGGGTTTCCATGGGTCGCAGCACCCAGTGGCTCTGGTATTCTGTATATGCAAGCAAGCAGGTCAGCTGGCGCACGAGGTATTTAGTGGTATCAGACTGGACAAGGAAGTTTGTATTTGGAAGAGACTCGAGCGGCATCTGA 1725 43.3 MRFFSFFTRASRAFHGSPTYSKLLVISTLSSGGLLAYADSQSDASSPIEECPKKRVLVLGTGWAGTSFLKDLDASKYDVQVVSPQNYFSFTPLLPSVTCGTVEARSIVEPVRNIMKKRKGEVKFWEAECTKIDAANKKVFCRSLVDNNLVGNREFALEYDYLVIAMGAQVNTFNTPGVKENCHFLKEVQDAQKIRKSVIDCFEMAVIPSLSDEERRRNLHFVIVGGGPTGVEFAAELHDFFKEDLVYLYPTVKDLVKISVIQSGDHILNAFDERISSFAEQKFQRDGIDVHTGCRVISVSDKEIKMKVKSSGEVCSIPHGLIVWSTGIMTRPVVKDFMEQIGQGSRRILTTDEWLRVKGTQNVYAIGDCATIDQRKIMKDIAAIFEAADKDNSGTLTVTEFQDVIDDILIRYPQVEIYLRSKHLRDVKDLLKDSQGHEDEVDIEGFKSALSHADTQMKNLPATAQVAAQQGAYLSRCFNRREQCTENPEGPRRFKSSGRYQFLPFRYKHLGQFAPLGGEQAAAELPGDWVSMGRSTQWLWYSVYASKQVSWRTRYLVVSDWTRKFVFGRDSSGI 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7955594 7960350 - Cp4.1LG15g07820.1 Cpe15g00785 482243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00785 574 SUPERFAMILY FAD/NAD(P)-binding domain 219 373 IPR036188 -
Cpe15g00785 574 SUPERFAMILY FAD/NAD(P)-binding domain 53 272 IPR036188 -
Cpe15g00785 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 54 384 IPR023753 GO:0016491
Cpe15g00785 574 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B2, MITOCHONDRIAL-RELATED 6 574 - -
Cpe15g00785 574 PANTHER NADH DEHYDROGENASE 6 574 IPR045024 GO:0003954|GO:0006116
Cpe15g00785 574 SUPERFAMILY EF-hand 329 457 IPR011992 -
Cpe15g00785 574 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Cpe15g00785 574 ProSitePatterns EF-hand calcium-binding domain. 389 401 IPR018247 -
Cpe15g00785 574 Gene3D - 422 573 - -
Cpe15g00785 574 Gene3D - 47 397 - -
Cpe15g00785 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 56 75 - -
Cpe15g00785 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Cpe15g00785 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 220 238 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01477 Cpe15g00785 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00785 Cpe-Chr15:7955594 Cpe16g00661 Cpe-Chr16:6951532 1.56E-13 dispersed
Cpe10g00830 Cpe-Chr10:4699863 Cpe15g00785 Cpe-Chr15:7955594 1.75E-12 wgd
Cpe15g00785 Cpe-Chr15:7955594 Cpe20g00406 Cpe-Chr20:2317680 0 wgd
Cpe15g00785 Cpe-Chr15:7955594 Cpe05g01477 Cpe-Chr5:10212332 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00785 K03885 - csv:101203130 1063.91