Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00790 ATGGGTTGGAAGAGATCCTCGAGGAATGACAATTTGAGGATCTGCGTGCAAGTTTTAGTCGGATTCGTTATCTGTTCAGCTCATGTTCTTGTCGGAATTACGAATCCTGGGGATGTCTTCCTGGATGGGGCATTGGGCAAGATCCGTGCGGTGACGCATGGCAAGGTGTTGTATGTAATGATTCAAGCATCATTAAAATGTATAATTGTTAATGCTGCTAATTTGGGAGGTGAACTGGGTGACGACTTGGGATTGTTTGCTTCGATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATTCCATCCAGTTTACCCATTACCATGCAGAACTTTTTTCTTTCAGCTAACGCGTTCACTGGAACTATTCCGAGTTCATTATCGTCTTTGATTCATCTGACAGCAATGTCGTTGAATGATAACAAATTAAGTGGACAAATACCAGATTCCTTTCAAGCCATTTCTCAATTGGTGAATTTGGACTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGCTAGCAACTTATTGGCACTGACCACCCTGAATTTGCAGAACAATCAGCTGTCGGGAACCCTCGATGTTCTGCAAGACCTTCCACTAAGAAACTTGTACTTGCCTCAGCTATTCTTTTCATTTGTAAAGGATGGAAATCCATTTAATTCTTCTGTTACTCCGGCGCCAACTCCTTCTGTATCTCCCCCATTAAAGCCAGCACCAGCACCACGAGTTTCAGGAGCACCGCCCGTTTCAGGTGCACCGCCAGTTTCTGGAGCTCCGCCGTCCTCTAAACGAAACCCAAAGAAACAGGCTGATGGACCATCAGCACCAGAGGAATCCAGTTCTGGAAGAAACAAGAAAAACACTAAAAGGGTTGTTTTGATAACAATTGCAGTAATTTTGTCATTCATAATTTTGGTTTTGGCATGTGTGCTGTTTATGCCGAGGTGCAGAAGGAGAAGAGTTGATAGTAGTTCCAAGCAACATCAGATAGGTGCTTATAGGGGCGAGAGAGAGAATGCTGGAAATCACGGATCCATGCACCATTCAATTGATCAGATACCAAATGTTCCAAAAGCAGCAGTTGTGAGGCCAAAGCAGGAACCTCAACCAGTGGCTCAGAAGGTCCCAAAAGCTCATGAAGAAACACAGAAAAATATGCCAAGAATCAGCGCTGTTCCAAAGAAGGATCATCATGAAGTAGATATGAACACACTCGATGTCTATCTAAGGCCTCCCCCTCCCCCACCACCACCACCACCACCACCTCCTGTTGAAGTGGTCTCTGCCGTGCCCATTGTTCCAGCTGAAGTTCCTCCCTTGAAGCCTCCCACTAAACATAAAATTACCTCAACTTTTGCAAAATCTTTTACCATTGCTTCCCTTCAGCAATATACAAACAGCTTTTCGCAAGAGAATCTTCTGGGAGAAGGAATGCTTGGGAGTGTATATAGAGCACAGCTTCCCAGTGGGAAGTTACTGGCCGTCAAGAAACTGGATAAGAGAGCATTCAGTCAGCAAAAGGACGATGAATTTCTGGAGTTAGTGAATAATATCGATAGAATTCGGCACGCTAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTTCGAGTATTGCAGTGGTGGAACATTGCAGGATGCCCTGCACTTAGATGAAGAGTTCAGAAAGAAACTTTCATGGAATGCTCGCATTAGAATTGCTCTTGGCGCTGCAAGAGCCTTGGAGTATCTACACGAGGTCTGTCAGCCGCCTGTAGTTCATAGGAATTTCAAGTCTGCAAATGTCCTGCTTGATGATGATCTTTCCGTGCGCATTTCAGATTGTGGTCTGGCTCCATTGATATCGAAAGGAGCGGTTAGTCGGCTATCTGGTCAGCTTCTAACGAAATACGGTTACGGAGCACCAGAATTTGAATCAGGAGTTTATACACTTGAGAGCGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGTCGGATGTCTTATGACAGAACGAGGTCCCGAGGTGAGCAGTTTCTAGTCAGATGGGCGATTCCTCAGCTTCACGACATAGAGGCATTGACAAGCATGGTCGATCCTTCACTCAACGGTCGATACCCTGCCAAGTCGTTATCGTACTTTGTCGATATCATATCAAAATGTGTTCAGTCGGAACCTGAATTCCGGCCACCAATGTCGACGGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCTCATGGCAGCGGTTCAAGTGAAGATTGA 2292 45.11 MGWKRSSRNDNLRICVQVLVGFVICSAHVLVGITNPGDVFLDGALGKIRAVTHGKVLYVMIQASLKCIIVNAANLGGELGDDLGLFASIQTIDLSNNHIGGSIPSSLPITMQNFFLSANAFTGTIPSSLSSLIHLTAMSLNDNKLSGQIPDSFQAISQLVNLDLSNNNLSGPLPPSASNLLALTTLNLQNNQLSGTLDVLQDLPLRNLYLPQLFFSFVKDGNPFNSSVTPAPTPSVSPPLKPAPAPRVSGAPPVSGAPPVSGAPPSSKRNPKKQADGPSAPEESSSGRNKKNTKRVVLITIAVILSFIILVLACVLFMPRCRRRRVDSSSKQHQIGAYRGERENAGNHGSMHHSIDQIPNVPKAAVVRPKQEPQPVAQKVPKAHEETQKNMPRISAVPKKDHHEVDMNTLDVYLRPPPPPPPPPPPPPVEVVSAVPIVPAEVPPLKPPTKHKITSTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIFEYCSGGTLQDALHLDEEFRKKLSWNARIRIALGAARALEYLHEVCQPPVVHRNFKSANVLLDDDLSVRISDCGLAPLISKGAVSRLSGQLLTKYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRSRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFVDIISKCVQSEPEFRPPMSTVVQDLLNMIRREPHGSGSSED 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7981963 7990199 - Cp4.1LG15g08010.1 Cpe15g00790 482248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00790 763 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 64 762 - -
Cpe15g00790 763 MobiDBLite consensus disorder prediction 368 390 - -
Cpe15g00790 763 Gene3D Phosphorylase Kinase; domain 1 445 550 - -
Cpe15g00790 763 MobiDBLite consensus disorder prediction 227 290 - -
Cpe15g00790 763 SUPERFAMILY Formin homology 2 domain (FH2 domain) 417 426 - -
Cpe15g00790 763 Gene3D Ribonuclease Inhibitor 57 215 IPR032675 -
Cpe15g00790 763 ProSiteProfiles Leucine-rich repeat profile. 182 204 IPR001611 GO:0005515
Cpe15g00790 763 MobiDBLite consensus disorder prediction 232 260 - -
Cpe15g00790 763 Pfam Protein tyrosine and serine/threonine kinase 476 747 IPR001245 GO:0004672|GO:0006468
Cpe15g00790 763 PANTHER OS01G0253100 PROTEIN 64 762 IPR045271 GO:0004714|GO:0006468
Cpe15g00790 763 SUPERFAMILY Protein kinase-like (PK-like) 448 747 IPR011009 -
Cpe15g00790 763 Gene3D Transferase(Phosphotransferase) domain 1 552 759 - -
Cpe15g00790 763 ProSiteProfiles Protein kinase domain profile. 473 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00790 763 Pfam Leucine rich repeat 112 169 IPR001611 GO:0005515
Cpe15g00790 763 SUPERFAMILY L domain-like 64 216 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00762 Cpe15g00790 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00790 Cpe-Chr15:7981963 Cpe20g00626 Cpe-Chr20:3917624 5.61E-15 dispersed
Cpe10g00833 Cpe-Chr10:4709935 Cpe15g00790 Cpe-Chr15:7981963 1.51E-127 wgd
Cpe15g00790 Cpe-Chr15:7981963 Cpe04g00762 Cpe-Chr4:7354179 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62869 PF07714 PK_Tyr_Ser-Thr 3.60E-42 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00790 - - csv:101213734 1065.06