Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00794 ATGGGTGGTTGTGTCTCTACAAGCAGCCATAGTACTTGTAGTAGCCAGAGCAATGGTGAATCAGTTTCTTCTTCATGTATGGGAATTAGATTTCGAGGTCGAAAGCGATCGAACTCCGACCATGTTTATGTTCTTCAGAATCTTCCTTCAGCTCCCAACAGGATCTTCTTGAATGGAAAGAGTAATTCTTCTTGTATTTTCACGCAACAAGGTCGCAAGGGCGTAAACCAGGACGCCATGGTTGTGTGGGAAGATTTCATGTCGGACGACACGATCTTTTGTGGGGTTTTTGATGGTCATGGACCTTACGGTCACCTTGTTTCTCGACGAGTGAGGGATACATTGCCTATAAAGTTGCTGTCGTTTTTTCAGTCTCCTCAGTTAAAGCAGAATGTCTCTGGTAAAACCTGTTTCCAGAGGAATTTGAAGACATCTCGAGAATGTGACGATTCTGAGAAGGATTGTTTTATCGAGGACTCGCAGAATTCGGTATGGCGAGATGCGTTCTTGAACTCGTATAAAGCTATGGATAAGGAGTTGAGATCACATCCTAATCTGGACTGCTTTTGTAGTGGTAGTACAGCAGTCACCATAGTTAAACAGGGGTCAAATCTGTTCATGGGGTACATCGGGGACTCTCGAGCAATCCTTGCCTCGAAGGACGCCAATGATTCGACAGTGGCGGTCCAGTTGACTGTGGATCTTAAGCCAGATTTGCCAAGAGAAGCTGAAAGAATAAAACGGTGTAAAGGTAGGGTGTTTGCATTGCAAGATGAGCCTGAAGTGCCAAGGGTGTGGTTACCTTTCGACGATGCGCCCGGTTTAGCCATGGCTCGTGCTTTTGGAGACTTCTGTTTGAAAGAATATGGAGTTATCTCTATACCTGAATTCTCACATCGAACCCTCACCGATGCTGATCAGTTCGTCGTTCTTGCATCAGACGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGACATAGTGGCCTCGGCCTCATCCCGGGCATCAGCTGCGAGATCCGTGGTGGACTCTGCTGCTCGTGAATGGAAACTAAAATACCCGACCTCGAAAATGGATGATTGTGCTGTTGTCTGCTTGTTTTTGGATGGGATGATGGACTCCGAATCCGATTGTGATGAACAAGGCTTCTCATCTGCAACGTCGCGTAGTATCCATTCGGGTGCTGCTATCGAATCCGATGATGGCCAGAAGTCTGAGCCATGTCTGCAAAGGAATAACACTGTCAGATCATCTGAGGACAACAAAACTTATGGGGGATTAGCTGATGATGACAGAGAGATTGGTGAAGCTGTACCTGCGGAAGATCAAAACTGGTCGGGTTTGGAAGGCGTCACTCGAGTGAACTCGCTCGTTCAACTTCCTAGATTTTCCGACAAAAGTCCAGTGTCTTAG 1416 46.68 MGGCVSTSSHSTCSSQSNGESVSSSCMGIRFRGRKRSNSDHVYVLQNLPSAPNRIFLNGKSNSSCIFTQQGRKGVNQDAMVVWEDFMSDDTIFCGVFDGHGPYGHLVSRRVRDTLPIKLLSFFQSPQLKQNVSGKTCFQRNLKTSRECDDSEKDCFIEDSQNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFVVLASDGVWDVLSNEEVVDIVASASSRASAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDGMMDSESDCDEQGFSSATSRSIHSGAAIESDDGQKSEPCLQRNNTVRSSEDNKTYGGLADDDREIGEAVPAEDQNWSGLEGVTRVNSLVQLPRFSDKSPVS 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8009641 8012971 - Cp4.1LG15g08000.1 Cpe15g00794 482252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00794 471 MobiDBLite consensus disorder prediction 1 24 - -
Cpe15g00794 471 MobiDBLite consensus disorder prediction 424 439 - -
Cpe15g00794 471 MobiDBLite consensus disorder prediction 396 444 - -
Cpe15g00794 471 CDD PP2Cc 62 369 IPR001932 -
Cpe15g00794 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Cpe15g00794 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Cpe15g00794 471 ProSiteProfiles PPM-type phosphatase domain profile. 63 369 IPR001932 -
Cpe15g00794 471 MobiDBLite consensus disorder prediction 407 422 - -
Cpe15g00794 471 Pfam Protein phosphatase 2C 164 347 IPR001932 -
Cpe15g00794 471 Gene3D - 56 371 IPR036457 -
Cpe15g00794 471 SMART PP2C_4 47 367 IPR001932 -
Cpe15g00794 471 SUPERFAMILY PP2C-like 54 371 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00794 Cpe16g00480 CCT
Cpe05g01484 Cpe15g00794 CCT
Cpe04g00768 Cpe15g00794 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00794 Cpe-Chr15:8009641 Cpe17g00991 Cpe-Chr17:7521732 4.10E-136 dispersed
Cpe15g00794 Cpe-Chr15:8009641 Cpe16g00480 Cpe-Chr16:5897634 3.09E-42 wgd
Cpe15g00794 Cpe-Chr15:8009641 Cpe04g00768 Cpe-Chr4:7384328 0 wgd
Cpe15g00794 Cpe-Chr15:8009641 Cpe05g01484 Cpe-Chr5:10246340 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00794 - - csv:101204594 832.787