Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00812 ATGGCAGACACATCACACCATTCATCGGTGTTTCAGAAGATATGTGGCCATTCTCACCTCACTTCTAGGCTTTCCCCTGGCTTTCAGTCCATACGTTATAGTACAACAGGTGTACATGCTAATGGAGTTTTGGAGAATCTCTTAAAGACATCTTATCATGGTACTGGCTTGGCTGGAGTTTCACCTTCTTCTCCGTTTCTTGTACAAGCTCCTTCTGAGAAAGGTGCAGCTGGGTTTGCTGTGGATTTTCTCATGGGAGGAGTATCTGCTGCTGTTTCGAAAACTGCTGCTGCTCCAATTGAGCGTGTCAAACTGCTGATACAAAATCAGGATGAGATGCTTAAAACTGGTAGGCTATCTGAGCCATACAAAGGAATTACTGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATTGCCTTATGGAGGGGAAACACAGCAAATGTCATCCGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCCTCTGGTGGTGCCGCTGGTGCTTCCTCTCTTTTATTTGTTTATTCCCTTGATTATGCTAGAACTCGTTTAGCCAATGATGCTAAGGCCGCTAAAAAGGGTGGTGAGAGACAGTTTAATGGTCTTGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATCGTGTATCGTGGTCTTTACTTCGGAATGTATGACTCGTTGAAGCCCGTGGTTCTGGTTGGTGAGTTGCAGGATAGTTTCCTTGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCTGGTTTGGCGTCGTACCCTATTGATACCGTCCGAAGAAGAATGATGATGACCTCAGGTGAAGCAGTCAAGTACAATAGCTCCTTGGACGCATTCAAACAGATCATTAAGAATGAGGGTACTAAATCTCTCTTCAAGGGTGCTGGGGCAAACATTCTGCGTGCTGTTGCCGGTGCTGGTGTGTTGGCTGGGTACGATAAGCTTCAGCTCCTTGTTCTTGGCAAGAAATATGGTTCTGGCGGTGGCGGTTAA 1143 44.79 MADTSHHSSVFQKICGHSHLTSRLSPGFQSIRYSTTGVHANGVLENLLKTSYHGTGLAGVSPSSPFLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGITDCFARTIKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGELQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGGG 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8106468 8109973 - Cp4.1LG15g08150.1 Cpe15g00812 482270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00812 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 286 368 IPR018108 -
Cpe15g00812 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 170 IPR018108 -
Cpe15g00812 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 274 IPR018108 -
Cpe15g00812 380 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 379 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe15g00812 380 PRINTS Adenine nucleotide translocator signature 79 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe15g00812 380 PRINTS Adenine nucleotide translocator signature 123 144 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe15g00812 380 PRINTS Adenine nucleotide translocator signature 156 168 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe15g00812 380 PRINTS Adenine nucleotide translocator signature 182 195 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe15g00812 380 PRINTS Adenine nucleotide translocator signature 287 303 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cpe15g00812 380 Pfam Mitochondrial carrier protein 283 369 IPR018108 -
Cpe15g00812 380 Pfam Mitochondrial carrier protein 181 274 IPR018108 -
Cpe15g00812 380 Pfam Mitochondrial carrier protein 78 174 IPR018108 -
Cpe15g00812 380 Gene3D Mitochondrial carrier domain 80 375 IPR023395 -
Cpe15g00812 380 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085
Cpe15g00812 380 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085
Cpe15g00812 380 PRINTS Mitochondrial carrier protein signature 145 165 IPR002067 GO:0055085
Cpe15g00812 380 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Cpe15g00812 380 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Cpe15g00812 380 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085
Cpe15g00812 380 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 2 379 - -
Cpe15g00812 380 SUPERFAMILY Mitochondrial carrier 78 364 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g01157 Cpe-Chr9:9841409 Cpe15g00812 Cpe-Chr15:8106468 5.22E-130 dispersed
Cpe11g00073 Cpe-Chr11:394265 Cpe15g00812 Cpe-Chr15:8106468 1.23E-62 dispersed
Cpe15g00812 Cpe-Chr15:8106468 Cpe17g00683 Cpe-Chr17:5467714 2.91E-168 dispersed
Cpe15g00812 Cpe-Chr15:8106468 Cpe20g00091 Cpe-Chr20:483199 1.11E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00812 K05863 - csv:101212128 674.47