Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00820 ATGATTTCAAGGTCTTACACAAATCTTTTAGATTTGGCTTCTGGAAATTTTCCAGCAATGGAAGTGAAAAGGAAGCGGTTCCCGCGGGTCATGACTGTTCCGGGTAATGTAGCTGAGCTTGACGATGATCAGGCCTACAGTGTGACATCTGAAAACCCGTCGTCAATTTCCTCAGATCGGATGATAATTGTAGCAAACCAGCTTCCTTTAAGAGCAAAGCGAAGGGAGGATGATAATTCCTGGAGTTTCAGTTGGAATGAAGATTCGTTGCTTTTGCAGCTTAAAGATGGGTTACCAGAAGATATGGAGGTTCTTTATGTCGGTTCTCTGAAAGTCGATATCCAACCGGACGAGCAAGATGAGGTATCCCAGATTTTGTTGGAGAAATTTAGGTGTATTCCTACATTTTTGCCTCCTGATATTTTGGAAAATTTTTATGATGGTTTCTGCAAGAGGAATTTGTGGCCTCTTTTTCATTATATGCTGCCATATTCTGCTGATCAGAAGGGTCGATTTGATCGCTCGATGTGGGAAGCATATGTATCAGCAAATAAGTTATTTTTCCAGAAAGTTGTAGAAGTCATCAACCCTGATGATGACTATATCTGGATCCATGATTACCATTTGATGGTATTGCCTACTTTCTTGAGAAGACGTTTTAACAGAGTTAAAATGGGGTTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATCTACCGCACCCTTCCTGTCAGAGAAGAGATTCTCAAGGCATTACTTAACTCTGATATCATCGGATTTCACACTTTCGATTATGCTCGCCATTTCCTTTCTTGTTGCAGCCGAATGTTGGGTTTGGAATACCAGTCAAAAAGGGGCTATCTTGGATTGGAATACTACGGTAGGACGATTGGAATAAAGATAATGCCCGTTGGTATTCATATGAATCGGATTGAATCGGTGATGAAACTTGCAGACGAGGATGCTAAGACTAGGGAACTCACGCAGCAATTTGCAGGGAAGACGGTGGTGCTTGGTGTTGATGATATGGACATTTTCAAAGGTATTAACTTGAAATTGTTAGCCATGGAACAGATGCTAAAGCAACATCCAAAGTGGCAGGGAAAGGCTGTACTGATCCAAATTGTAAACCCTGTCAGAGGCAAGGGAAGAGATTTACAGGAAATAGAAGATGAAATAAAAGAAAGCTGCAGAAGGATCAATAAGGAGTATGGGCATCCTGGTTATGAGCCGATAGTACTTCTCGACCGGCACGTGCCAATTACTGAAAGGGTTGCTTATTATAGCATTGCTGAGTGCGTAGCAGTCACTGCTGTTAGAGATGGCATGAACTTAACTCCTTATGAGTATGTTGTCTGTAGGCAGGGAATATCCACCTCTCAAAAATGCTTGAACTTCAGCGGACCAAAAAAGAGCATGCTCGTCATATCCGAATTTATCGGGTGTACTCCATCACTGAGCGGAGCATTTCGTGTCAACCCATGGAATGTTGAAAGTACATCAGAGGCTTTTAATGAAGCAATCTCAATGGCTGATTCAGAGAAGCAGCTGCGACATGAGAAGCATTATCGTTATGTTGCTACACACGACGTGGCTTATTGGTCTCGTAGTTTCTTGCAAGACATGGAGAGAACTTGCTCAGAACATTTCAGGAGACGATGTTGGGGAATTGGTTTTAGTTTCGGATTCAGGGTTGTAGCTCTTGATCCCAATTTCAGAAAACTTTCAGTAGATGCCATTGTATCATCTTACAGTCGGGCCGATAGTCGGGCCATTCTTTTGGACTATGATGGCACTGTGATGCCCCAAAACTCCATAAACAAGTCACCGAGCGAACAGGTTATCTCTATCCTTAACACGCTTTGTGCAGATGCAAAAAATGTCGTCTTCATTGTGAGTGGACGAGGAAGGGACAGCTTAAGCAAGTGGTTTCGCCCATGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATTTCTTGAGGCAGTCACAAAATGAGGAGTGGAAGATCTGCGGCCAAAATTCTGATTTCGGATGGATGCAGATAGCCGAACCTGTTATGAAATTATACACCGAGGCTACTGATGGTTCATCAATCGAACGAAAGGAAAGTGCTTTGGTTTGGCAGTATCGAGATGCTGATCCTGGCTTCGGATCGTCCCAGGCGAAGGAGATGTTGGATCATTTAGAGAGTGTTTTGGCAAACGAACCTGTTGCAGTCAAAAGCGGCCAATTTATTGTAGAAGTGAAACCACAGGGGGTTACCAAAGGCCTAGTGGCTGAAAAAATCTTCTCATCAATGGCGGAGGATGGGAATCACGCCGACTTCGTGTTGTGTATTGGCGACGACAGATCGGACGAGGACATGTTTGAAATAATTGGCAACGCGTTGTCCAGTAATAATATTCTTTCTCCAACGGCGTCAGTTTTTGCCTGCACTGTTGGGCAAAAGCCAAGCAAAGCCAAATATTACTTGGACGACACAGCTGAAGTAATAAGCATGCTTGAATACCTGGCCGAAGCTTCTAGCCCATTGCCATCCTCTGAAGATGAAGAAGAAGGTCAAAACGCTTCTTGA 2577 43.34 MISRSYTNLLDLASGNFPAMEVKRKRFPRVMTVPGNVAELDDDQAYSVTSENPSSISSDRMIIVANQLPLRAKRREDDNSWSFSWNEDSLLLQLKDGLPEDMEVLYVGSLKVDIQPDEQDEVSQILLEKFRCIPTFLPPDILENFYDGFCKRNLWPLFHYMLPYSADQKGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMNRIESVMKLADEDAKTRELTQQFAGKTVVLGVDDMDIFKGINLKLLAMEQMLKQHPKWQGKAVLIQIVNPVRGKGRDLQEIEDEIKESCRRINKEYGHPGYEPIVLLDRHVPITERVAYYSIAECVAVTAVRDGMNLTPYEYVVCRQGISTSQKCLNFSGPKKSMLVISEFIGCTPSLSGAFRVNPWNVESTSEAFNEAISMADSEKQLRHEKHYRYVATHDVAYWSRSFLQDMERTCSEHFRRRCWGIGFSFGFRVVALDPNFRKLSVDAIVSSYSRADSRAILLDYDGTVMPQNSINKSPSEQVISILNTLCADAKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYFLRQSQNEEWKICGQNSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVTKGLVAEKIFSSMAEDGNHADFVLCIGDDRSDEDMFEIIGNALSSNNILSPTASVFACTVGQKPSKAKYYLDDTAEVISMLEYLAEASSPLPSSEDEEEGQNAS 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8155545 8162403 - Cp4.1LG15g08140.1 Cpe15g00820 482278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00820 858 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 851 - -
Cpe15g00820 858 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Cpe15g00820 858 Pfam Trehalose-phosphatase 593 828 IPR003337 GO:0003824|GO:0005992
Cpe15g00820 858 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 546 - -
Cpe15g00820 858 TIGRFAM T6PP: trehalose-phosphatase 589 839 IPR003337 GO:0003824|GO:0005992
Cpe15g00820 858 CDD HAD_TPP 591 831 - -
Cpe15g00820 858 Gene3D - 589 694 IPR023214 -
Cpe15g00820 858 Gene3D - 718 852 IPR023214 -
Cpe15g00820 858 Gene3D Glycogen Phosphorylase B; 53 313 - -
Cpe15g00820 858 Gene3D Glycogen Phosphorylase B; 314 527 - -
Cpe15g00820 858 SUPERFAMILY HAD-like 590 839 IPR036412 -
Cpe15g00820 858 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 796 IPR006379 -
Cpe15g00820 858 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Cpe15g00820 858 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00803 Cpe15g00820 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00950 Cpe-Chr1:5627484 Cpe15g00820 Cpe-Chr15:8155545 0 dispersed
Cpe14g00973 Cpe-Chr14:8231859 Cpe15g00820 Cpe-Chr15:8155545 0 dispersed
Cpe10g00131 Cpe-Chr10:838756 Cpe15g00820 Cpe-Chr15:8155545 0 wgd
Cpe15g00820 Cpe-Chr15:8155545 Cpe19g01083 Cpe-Chr19:7365597 0 wgd
Cpe15g00820 Cpe-Chr15:8155545 Cpe04g00803 Cpe-Chr4:7586345 0 wgd
Cpe15g00820 Cpe-Chr15:8155545 Cpe09g00783 Cpe-Chr9:7260120 2.17E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00820 K16055 - csv:101209914 1669.44