Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00822 ATGGACCGCCGTGTTCGTACAAACCCATTTGTCTCAGAGCAAGAAGATCCAGAAGCCACGTCGGATGACGGCCAACCGGAGTCACCCTCCGACGACAATGATTCAAAACCCGCCGCCGGCCCCCCTCCCAAAAAGAGTAGAAGGGGAGTTCAGAAGAGAGTAGTGTCCGTACCGATCGGCGACGTGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCCAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCACCAAGCTCGTTATTACCTACGCTTTCGACCACAACCACCAACTACCGGCAACCAAATCTCACCACCACCACCACAATTCCTCGCCGTCCTCCGCCGCGATCGCCGCTGCACCCGACTTCTCATCCCCGGGGAGCACTACGACGTCGTCGTCCACTTCCTCCGGCGACCATACGAACACCGATCTCTCATTGCCGGCAGCGGCGAAATTCGAGGAGGCGGCTGCGGTTTTCGCGAGTCAGCCTGAACTAGAACTCGGCGGCGATTCGCTGATGATAAAACCATGCATCGGCGATTTTGGATGGTTGGCTGACGTGGCATATGATAGAATCCTGGAGGGCCCAATTTGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACAAGAGGAGATGACGAGGACGAATCGTTATTTGCTGACCTTGGGGAGTTACCCGAAGGCTCTATGGTTTTCGGGCGACGGCGAGCGGTCCAACCGGACGGACCGAACCGGACACGTGGCAGAGTATTAGACTGCTAG 888 56.19 MDRRVRTNPFVSEQEDPEATSDDGQPESPSDDNDSKPAAGPPPKKSRRGVQKRVVSVPIGDVEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVITYAFDHNHQLPATKSHHHHHNSSPSSAAIAAAPDFSSPGSTTTSSSTSSGDHTNTDLSLPAAAKFEEAAAVFASQPELELGGDSLMIKPCIGDFGWLADVAYDRILEGPICGGGDIFDDADVMVLSTRGDDEDESLFADLGELPEGSMVFGRRRAVQPDGPNRTRGRVLDC 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8165599 8169020 - Cp4.1LG15g08170.1 Cpe15g00822 482280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00822 295 MobiDBLite consensus disorder prediction 146 179 - -
Cpe15g00822 295 ProSiteProfiles WRKY domain profile. 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00822 295 MobiDBLite consensus disorder prediction 136 179 - -
Cpe15g00822 295 Gene3D WRKY domain 62 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe15g00822 295 PANTHER OS01G0750100 PROTEIN 18 279 - -
Cpe15g00822 295 SMART WRKY_cls 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00822 295 MobiDBLite consensus disorder prediction 1 87 - -
Cpe15g00822 295 SUPERFAMILY WRKY DNA-binding domain 70 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe15g00822 295 Pfam WRKY DNA -binding domain 76 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00822 295 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 279 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00822 Cpe-Chr15:8165599 Cpe19g01184 Cpe-Chr19:7950073 1.46E-35 dispersed
Cpe15g00822 Cpe-Chr15:8165599 Cpe20g00477 Cpe-Chr20:2758523 1.89E-45 wgd
Cpe15g00822 Cpe-Chr15:8165599 Cpe04g00801 Cpe-Chr4:7578058 1.96E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50655 PF03106 WRKY 1.10E-24 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00822 - - csv:101209422 484.567