Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00859 ATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCATTATCATAAATACGAAGAAGGGGAAGTCTGTGGGATTTGTGGCCATCGGGTTCCCGCTACATCGGAGAAAACTTCGTTGCAATTTGCCGCGTTTCCTTCAGAGATTTTGCCGGAGTTTCTTTATCTGGGAAGCTATGATAACGCTTCCCGCTCTGAACTTTTGAAGACTCAAGGAATCTCCCGCGTTCTTAATACTGTGCCTGATTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATATGATAAGACTTTACCTTTTGATGATGCAGTTGAATTCCTAGAGCAATGTGAAAGAGACAAGGCTCGTGTTCTGGTGCACTGCATGTCAGGAAAAAACAGGTCTCCAGCTATTGTAATAGCGTTCTTGATGAAATGCAAAGGTTGGAGACTTGCTCAGAGTTATCAGTGGGTTAAAGAGCGGAGGCCATCCGTCGACTTAACTGAACCTATCTATCAGCAGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATCATCCCAAAACTCCCTTCCAACCCTTCCAGTCTTCCCTCCTGTTGGTCTGCCTTCTTTTGGCTTCAACTTCCCAAAGACCAGCGACCCAGTTCCTACAACACCATTCAACACCATTGCTGCAACTTCCATCTTTACCTGCCCAACCGTAGATGTACCGTCCCACGAGTTTACATTCGGTGCTGGGCAGACTCAAAACAGTTTCGCCGCTAATCCACAGATCAACCAGCAGCCACATCCAAATGGGTAA 795 46.42 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQFAAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPDCQNLYKNSFTYHCLQYDKTLPFDDAVEFLEQCERDKARVLVHCMSGKNRSPAIVIAFLMKCKGWRLAQSYQWVKERRPSVDLTEPIYQQLQEYEQKVFGSSQNSLPTLPVFPPVGLPSFGFNFPKTSDPVPTTPFNTIAATSIFTCPTVDVPSHEFTFGAGQTQNSFAANPQINQQPHPNG 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8375603 8379613 - Cp4.1LG15g08660.1 Cpe15g00859 482317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00859 264 Pfam Dual specificity phosphatase, catalytic domain 55 179 IPR000340 GO:0008138|GO:0016311
Cpe15g00859 264 Gene3D Protein tyrosine phosphatase superfamily 41 188 IPR029021 -
Cpe15g00859 264 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 264 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Cpe15g00859 264 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Cpe15g00859 264 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 183 IPR029021 -
Cpe15g00859 264 CDD DSP_plant_IBR5-like 47 176 - -
Cpe15g00859 264 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Cpe15g00859 264 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Cpe15g00859 264 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 264 - -
Cpe15g00859 264 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00859 Cpe-Chr15:8375603 Cpe17g00126 Cpe-Chr17:803684 2.48E-13 dispersed
Cpe15g00859 Cpe-Chr15:8375603 Cpe01g01110 Cpe-Chr1:6560631 7.56E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00859 K04459 - csv:101211000 486.878