Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00873 ATGGTAGCTGGTGGTGCCGGTTGTTCCGGTTTGGTGATTGGGTTTTTGGGATTGCAGGTGGGGAAGTGTATGAGGGATTTGATTTGGAATTCTGCAGAATTGGACTTTTTCTCTGAATATGGAGATGCCAACAGATTCAAAATCCAGGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACATGATATTTTTGAACATGTATCTGATGCTGCTCGGATTCTTCGTGAGATAAAGCTACTCAGACTTCTACGACATCCCGATATTGTCGAAATCAAACACATTATGTTACCACCTTCTCGCAGGGGTTTCAAAGATATTTTTGTTGTGTTCGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAACGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTACCAGCTACTCCGTGCACTGAAATATATTCACACAGCAAATGTTTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAGTTTGTGATTTTGGATTGGCTAGAGTTGCTTTCAGCGACACCCCAACAACAATATTTTGGACGGACTATGTCGCTACCAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGGTGCATATTTGCTGAAGTACTGACCGGAAAACCACTTTTTCCTGGTAAAAATATTGTTCACCAACTTGATTTGATGACAGATCTCCTTGGAACGCCTTCGTTAGATACCATTTCTCGGGCAAGTTCCATTATATTATGTATAGTAAGAAATGAAAAGGCTAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCACAGAAGTTCCCAAATGTGGATCCTCTAGCCCTGCAATTACTACGACGATTGCTTGCATTTGATCCAAAGGATCGACCTACTGCCGAAGAGGTCACGAAAGACGACATTCGCGAGCTGATATTCCTCGAGATACTAGAATACCATCCTCAACTGCTGAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTTGACCAGTTCAAAAGGCAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTCTTGAAAGAAAGCATGCATCTCTTCCTAGGTCTTCAGTACAATCAAATACCATTCCTCCTAAGCCAACATCAAATATTGTTTCCTTTAAAGACCGATATGCACCAGCAGGCTCATACAGCAGCCAGAGGATTGCTGCTACTCAAGCCAAGCCTGGAAGAATTTCGGGCCCGGTTATGCCATACGATAGCGGTGGAAGTGTCGTTAAAGATGCTTACGACCCAAGAATGTTAATTAGAAGTGCCCTCCCTTCTCATGCTATCCATCCCACATATTATTACCAACAATCTTGCGGCCAAAATGAAGGAAGATCAGCAACAGGGGCTGAGCAGGACACTTCCTTGCAATGTAAACAATCCCCTCAATGTGGAATGGCTGCCAAGTTAGCAGCAGATACAGCTGCTACTGGTGCTTTCTCAAATCCTTTCTTTATGGCGCGAGTAGGCATCCCCAAGGTGGGAAACAATGACCGTGCTGCTGCACGTTTGCAGGTAAATGCTCAATATGATGCTGGAGCCATTGCTGCCACCACCCGAAGAAACGCGGGTGCAGTCGAGTATGGTATGGCAAGAATGTATTAG 1779 42.72 MVAGGAGCSGLVIGFLGLQVGKCMRDLIWNSAELDFFSEYGDANRFKIQEVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRASSIILCIVRNEKARRYLTSMRKKQPIPFSQKFPNVDPLALQLLRRLLAFDPKDRPTAEEVTKDDIRELIFLEILEYHPQLLKDYLNGTERSNFLYPSALDQFKRQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKPTSNIVSFKDRYAPAGSYSSQRIAATQAKPGRISGPVMPYDSGGSVVKDAYDPRMLIRSALPSHAIHPTYYYQQSCGQNEGRSATGAEQDTSLQCKQSPQCGMAAKLAADTAATGAFSNPFFMARVGIPKVGNNDRAAARLQVNAQYDAGAIAATTRRNAGAVEYGMARMY 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8465383 8469018 - Cp4.1LG15g08710.1 Cpe15g00873 482331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00873 592 ProSiteProfiles Protein kinase domain profile. 46 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00873 592 ProSitePatterns Protein kinases ATP-binding region signature. 52 76 IPR017441 GO:0005524
Cpe15g00873 592 Gene3D Transferase(Phosphotransferase) domain 1 130 341 - -
Cpe15g00873 592 ProSitePatterns MAP kinase signature. 81 184 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe15g00873 592 Gene3D Phosphorylase Kinase; domain 1 44 129 - -
Cpe15g00873 592 CDD STKc_TDY_MAPK 45 357 - -
Cpe15g00873 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 339 460 - -
Cpe15g00873 592 SMART serkin_6 46 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00873 592 Pfam Protein kinase domain 47 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00873 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 30 340 - -
Cpe15g00873 592 SUPERFAMILY Protein kinase-like (PK-like) 43 341 IPR011009 -
Cpe15g00873 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 339 460 - -
Cpe15g00873 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 30 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01548 Cpe15g00873 CCT
Cpe15g00873 Cpe16g00740 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00873 Cpe-Chr15:8465383 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe15g00873 Cpe-Chr15:8465383 Cpe16g00730 Cpe-Chr16:7402300 0 wgd
Cpe15g00873 Cpe-Chr15:8465383 Cpe04g00845 Cpe-Chr4:7825050 0 wgd
Cpe15g00873 Cpe-Chr15:8465383 Cpe05g01548 Cpe-Chr5:10632667 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62874 PF00069 Pkinase 1.80E-64 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00873 - - csv:101214068 987.638