Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00881 ATGTCAAATGAAGAAGGGAAGAATCTATACCAGCCGTATGATCCATTCCATTACAACCAGCTGGATATGAACCGTTCGATCTTCCATCAGCAGCACCCACCGTTGGATCCTGCTTTGATGAGCTTCACTAACTTCTTGGACACCTCGTTGGACTACAACAGCCTGTCGAGAGCGTTCGACGTGTCGTGCTCTTCATCTGAAGTCATTTCTCCGGTGGACGACGTGTCGAAAAACAAGGCTTCTTGTGGAGGCAAGAATTTGAACCAATCTTCAACCACCCAGAATTCTTCTGTGTCGTCTTCGTCTAATGAGGCCGTCGTTGAAGAAGATTCAATCAAGAGCATCAAAGAGGACCCAAAAGATGAAGAAAAGTCCAAGAAACAGAACAACATATCAAAAAAGAAAGAGAAGAGGCAGAGGGAGCCACGGTTTGCTTTCTTGACAAAGAGTGAGATAGATCACCTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAGGCAGTAAAAAACAGTCCTTACCCAAGAAGCTACTACAGATGCACGAGTCAAAAGTGTTTAGTGAAGAAGCGAGTGGAAAGATCATATCAAGATCCATCTGTGGTGATTACTACATATGAAGGTCAACACAACCACCATTGCCCAGCTACACTCCGAGGCCATTCTGCTGGAATCATGTCGTCTCCGTTTTATGCATCCGCGGCGTCGACGTCGCTCACCGCACCCTCCTCTGGTCCTACGCTTCCTCATGAACTCTTTTCGCATTTGTTACCGACCAACTCTCGAGCCGACCCGGCATCGGGGATGTACCAGAATCTAAGCCTTCAAATGCCTGATCATTATGGTTTGTTGCAAGATTTGTTCACTCAAAAATAG 876 45.66 MSNEEGKNLYQPYDPFHYNQLDMNRSIFHQQHPPLDPALMSFTNFLDTSLDYNSLSRAFDVSCSSSEVISPVDDVSKNKASCGGKNLNQSSTTQNSSVSSSSNEAVVEEDSIKSIKEDPKDEEKSKKQNNISKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCLVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYASAASTSLTAPSSGPTLPHELFSHLLPTNSRADPASGMYQNLSLQMPDHYGLLQDLFTQK 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8508582 8510036 + Cp4.1LG15g08740.1 Cpe15g00881 482339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00881 291 Gene3D WRKY domain 139 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe15g00881 291 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00881 291 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 289 IPR044810 GO:0003700
Cpe15g00881 291 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 16 289 - -
Cpe15g00881 291 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00881 291 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00881 291 MobiDBLite consensus disorder prediction 109 142 - -
Cpe15g00881 291 MobiDBLite consensus disorder prediction 80 142 - -
Cpe15g00881 291 MobiDBLite consensus disorder prediction 81 108 - -
Cpe15g00881 291 SUPERFAMILY WRKY DNA-binding domain 148 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00881 Cpe16g00728 CCT
Cpe15g00881 Cpe16g00728 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00144 Cpe-Chr8:939405 Cpe15g00881 Cpe-Chr15:8508582 1.61E-43 dispersed
Cpe10g00103 Cpe-Chr10:689343 Cpe15g00881 Cpe-Chr15:8508582 3.68E-58 dispersed
Cpe17g00738 Cpe-Chr17:5848872 Cpe15g00881 Cpe-Chr15:8508582 6.52E-43 dispersed
Cpe19g01120 Cpe-Chr19:7539284 Cpe15g00881 Cpe-Chr15:8508582 1.62E-21 dispersed
Cpe15g00881 Cpe-Chr15:8508582 Cpe16g00728 Cpe-Chr16:7390912 3.19E-58 wgd
Cpe15g00881 Cpe-Chr15:8508582 Cpe04g00849 Cpe-Chr4:7845052 1.06E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50658 PF03106 WRKY 2.40E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00881 - - mcha:111016781 415.231