Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00895 ATGGCTGCCCAAGTCAGCACTCTGATTCGGGTACTCGCCGGCGGCGGCGGAGGCGGAGGCTACAACGACGAAGATAACCGGACGCCCCTCGGTAATGGCCAGGAACCAACGCCTCTCGTTACTCGCGATTTGCTCGGCCAATCTTCCAACCTCGCCGCCTCTCAGGAATTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAAAGACTCGACTTGAAGTCGGGGAAAGTTTACATACAGAGAAGTCAAACACCGGATTCTCCTCTGAATTCAGATTCAAAACACCACCAAATGACAAACCAAACAGAGTCCAAATTCCAGGATTTGAATTTCCCCCCATCTCCTTCAAAACGAACATTAAATCTCTTCAATGAAACCAGCTTGGATTTGAAACTGACGTCGTCGCCGTCGCCGTCGCCGTCTCCGTCGACCAATTACGCCAGTGTTTGCACTCTGGATAAGGTGAAATCCGCTCTGGAAAGAGCCGACAAGGAGCTAGTTAAAAAAAGGTCTTCGCTATGGAAATCGACGTCGTCGCCGTCGTCGTACTCGTCGTCGTCGTCTGCGGCGGCGAAGGAAATTCAAGAAGAAGAAGAAGCGGTGGAAAATAGAAACGAGACGGCGGCGCCGATGGCGGTGGGTTGCCGTGGATGTTTATCTTATGTATTGGTAACGAAAAACAACCCGAGATGTCCTCGTTGCAATTCTGTTGTTCCGTTGGCGAGCATGAAGAAACCTCGGATTGATCTAAACATGTCTATATAA 768 50.78 MAAQVSTLIRVLAGGGGGGGYNDEDNRTPLGNGQEPTPLVTRDLLGQSSNLAASQELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKHHQMTNQTESKFQDLNFPPSPSKRTLNLFNETSLDLKLTSSPSPSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSTSSPSSYSSSSSAAAKEIQEEEEAVENRNETAAPMAVGCRGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLNMSI 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8613048 8614562 - Cp4.1LG15g08960.1 Cpe15g00895 482353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00895 255 MobiDBLite consensus disorder prediction 173 192 - -
Cpe15g00895 255 MobiDBLite consensus disorder prediction 27 41 - -
Cpe15g00895 255 MobiDBLite consensus disorder prediction 170 206 - -
Cpe15g00895 255 MobiDBLite consensus disorder prediction 12 41 - -
Cpe15g00895 255 PANTHER PUTATIVE-RELATED 1 254 - -
Cpe15g00895 255 MobiDBLite consensus disorder prediction 82 121 - -
Cpe15g00895 255 Coils Coil 153 173 - -
Cpe15g00895 255 Coils Coil 253 255 - -
Cpe15g00895 255 PANTHER F3O9.30 1 254 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00860 Cpe15g00895 CCT
Cpe15g00895 Cpe16g00715 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00895 Cpe-Chr15:8613048 Cpe16g00715 Cpe-Chr16:7288796 1.46E-76 dispersed
Cpe15g00895 Cpe-Chr15:8613048 Cpe16g00714 Cpe-Chr16:7287369 9.73E-14 wgd
Cpe15g00895 Cpe-Chr15:8613048 Cpe04g00860 Cpe-Chr4:7918265 6.38E-135 wgd
Cpe15g00895 Cpe-Chr15:8613048 Cpe05g01568 Cpe-Chr5:10784277 1.26E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00895 - - cmos:111454876 404.831