Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00903 ATGGCCGCACTTCCGCTCTTCAGATCTGCACCCGCCGCTTCTATTGTTCAAGCATCTCTTTCCTCCTCTTCTGCCGATCAGTTTACGACCTCGTACGTTAATTTGAATTCTTCGAAGTTTCAATCGAGCATTTTCGGTGCCCATGGTCCAAGCGGTTCACTTTCCTTGCAGCTTCGTAGAACCCAGAATATTCAGCCTATTAGAGCTACAGCCACTGAAATGCCTCCGACGGTTCAGAAACCAAGGAGCGGTGGAAAGACAAGGATCGGAATCAATGGTTTTGGACGTATTGGAAGGTTGGTATTGCGGATTGCAACCTCGAGGGATGATATTGATGTAGTTGCAGTTAATGACCCTTTTGTTGATGCAAAGTACATGGCATACATGTTCAAGTTTGATTCTACACATGGTAATTTTAAGGGCACGATTAACATTGTGGATGATTCAACTTTGGAAATCAATGGGAAACAAATAAAAGTTTTAAGTCAAAGGGATCCAGCAGAAATTCCTTGGGGCGAGTTTGGGGTTGAGTTTGTTGTTGAATCCTCTGGGGTTTTCACAACGACAAACAAGGCATCGGCGCACTTGAAGGTGGTTCATGAGGTTTTTGGTATCGCAGAAGGTTTGATGACCACCGTGCATGCAACTACAGCTACTCAAAAAACTGTTGATGGCCCCTCAATGAAGGATTGGCGTGGGGGTCGTGGAGCTGCACAAAATATCATCCCGAGTTCTACCGGTGCTGCAAAGGCTGTGGGAAAAGTTCTTCCTGAGCTCAACGGAAAACTTACGGGGATGGCATTTCGTGTTCCAACACCTAATGTATCTGTTGTGGACTTGACTTGTAAACTAGAGAAGAGCGCTTCTTATGAAGATGTCAAGGCTGCAATCAAGTATGCCTCAGAAGGCCCACTTCAGGGTATCCTCGGTTACACAGATGAGGACGTTGTCTCAAATGATTTTGTTGGGGACTCAAGGTCAAGTATATTTGATGCAAAGGCCGGAATAGGTCTCAGCGACTCCTTCATGAAACTTGTCTCCTGGTATGACAACGAGTGGGGATACAGCAACCGAGTGTTGGACCTCATAGAGCACATGGCGTTGGTGGCAGCCAAGAAGTGA 1122 46.17 MAALPLFRSAPAASIVQASLSSSSADQFTTSYVNLNSSKFQSSIFGAHGPSGSLSLQLRRTQNIQPIRATATEMPPTVQKPRSGGKTRIGINGFGRIGRLVLRIATSRDDIDVVAVNDPFVDAKYMAYMFKFDSTHGNFKGTINIVDDSTLEINGKQIKVLSQRDPAEIPWGEFGVEFVVESSGVFTTTNKASAHLKVVHEVFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCKLEKSASYEDVKAAIKYASEGPLQGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSDSFMKLVSWYDNEWGYSNRVLDLIEHMALVAAKK 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8679143 8683278 + Cp4.1LG15g09080.1 Cpe15g00903 482361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00903 373 Gene3D - 352 364 - -
Cpe15g00903 373 Gene3D Dihydrodipicolinate Reductase; domain 2 201 351 - -
Cpe15g00903 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 207 IPR036291 -
Cpe15g00903 373 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 197 372 - -
Cpe15g00903 373 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 7 197 - -
Cpe15g00903 373 Gene3D - 79 200 - -
Cpe15g00903 373 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 88 188 IPR020828 GO:0051287
Cpe15g00903 373 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 305 320 IPR020831 GO:0016620
Cpe15g00903 373 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 208 224 IPR020831 GO:0016620
Cpe15g00903 373 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 265 282 IPR020831 GO:0016620
Cpe15g00903 373 SMART gp_dh_n_7 87 207 IPR020828 GO:0051287
Cpe15g00903 373 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 196 349 IPR020829 GO:0016620
Cpe15g00903 373 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 7 197 IPR020831 GO:0016620
Cpe15g00903 373 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 197 372 IPR020831 GO:0016620
Cpe15g00903 373 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 188 349 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00903 Cpe16g00709 CCT
Cpe04g00865 Cpe15g00903 CCT
Cpe05g01033 Cpe15g00903 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01033 Cpe-Chr5:6773286 Cpe15g00903 Cpe-Chr15:8679143 0 dispersed
Cpe06g00010 Cpe-Chr6:37214 Cpe15g00903 Cpe-Chr15:8679143 8.77E-80 dispersed
Cpe09g00978 Cpe-Chr9:8696190 Cpe15g00903 Cpe-Chr15:8679143 3.63E-123 dispersed
Cpe15g00903 Cpe-Chr15:8679143 Cpe20g00323 Cpe-Chr20:1817586 7.39E-123 dispersed
Cpe15g00903 Cpe-Chr15:8679143 Cpe16g00709 Cpe-Chr16:7255572 0 wgd
Cpe15g00903 Cpe-Chr15:8679143 Cpe04g00865 Cpe-Chr4:7943557 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00903 K00134 - csv:101215988 613.224