Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00904 ATGCATAAATTAAGCAGAGGACACCGAGATAAAGTCCACCAGTTTATGGCTATAACTGGTACAAGTGAAAAGGTTGCTCATCAGGCCCTGAAGGCTAGTGATTGGCATCTTGAAGGAGCTTTTGATGTATTTTACAGTCAACCCCAAATTAAAGCGTTCACTGACTCTAGACATTTGGAAGAGCTTTATAACAGATATAAAGATCCATATGTTGATATGATATTGGCTGATGGTATCTCACTGCTCTGTAATGACCTTCAGGTGGATCCTCAAGATATAGTGATGTTGGTTGTTTCATGGCACATGAAGGCAAACACAATGTGTGAGTTTTCCAAACAGGAGTTTATAGGTGGATTACAAGCACTAGGGATAGATTCTCTGGAGAGGTTCCGTGAAAGGATACCATATATGAACTCTGAGTTGAAAGATGAACAAAAGTTCCGTGAGATTTACAACTTTGCATTTGGTTGGGCAAAAGAAAAGGGGCAAAAATCTTTAGCATTGGACACTGCAATTGGAATGTGGCAGTTACTATTTGCTGAAAAGCAGTGGCCCCTCGTCGACCACTGGTGTCAGTTCTTGCAGGCTCGGCATAATAAAGCTATTTCTAGGGACACATGGTCTCAACTTCTGGAGTTTGCAAGGACTGTGGAGCCTATGCTATCAAATTACGATGCCGAAGGTGCTTGGCCATACCTCATCGATGAGTTTGTCGAATACCTGAATGAGAATGGCATAGTCCAGACTGTGCCGCCAAATGATTTGAATCAAATAAGATGA 780 41.79 MHKLSRGHRDKVHQFMAITGTSEKVAHQALKASDWHLEGAFDVFYSQPQIKAFTDSRHLEELYNRYKDPYVDMILADGISLLCNDLQVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLQALGIDSLERFRERIPYMNSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFARTVEPMLSNYDAEGAWPYLIDEFVEYLNENGIVQTVPPNDLNQIR 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8683531 8689056 - Cp4.1LG15g09120.1 Cpe15g00904 482362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00904 259 Gene3D - 53 142 - -
Cpe15g00904 259 Gene3D - 5 47 - -
Cpe15g00904 259 Gene3D Cullin, PONY binding domain 143 249 IPR042460 -
Cpe15g00904 259 SUPERFAMILY UBA-like 5 46 IPR009060 GO:0005515
Cpe15g00904 259 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 14 248 - -
Cpe15g00904 259 CDD UBA_DCNL 8 48 - -
Cpe15g00904 259 Pfam UBA-like domain 10 47 - -
Cpe15g00904 259 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Cpe15g00904 259 Pfam Cullin binding 131 240 IPR005176 -
Cpe15g00904 259 PANTHER RP42 RELATED 14 248 IPR014764 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00866 Cpe15g00904 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01625 Cpe-Chr2:13599780 Cpe15g00904 Cpe-Chr15:8683531 5.30E-29 dispersed
Cpe03g01162 Cpe-Chr3:9526402 Cpe15g00904 Cpe-Chr15:8683531 1.34E-27 dispersed
Cpe01g02395 Cpe-Chr1:19997270 Cpe15g00904 Cpe-Chr15:8683531 1.12E-20 transposed
Cpe15g00904 Cpe-Chr15:8683531 Cpe04g00866 Cpe-Chr4:7949711 7.95E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00904 K17822 - csv:101216476 507.294