Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00905 ATGGTGGCTACCAAGGCTAAAGTCTGCCTGGATGCGGGTCTACCCACTGAGGATAATCGCACCCGCAGGAGTGCAATGGGAGGTTTTAAGGTTTATACGGAGAAAGATAAGATTAAAGCTGATTCCAGTTGCAAGAAGCCTGTAACAATGAAAAAGGAGCCTTCAACAGATTGTGTGAATCAACCAAAGGGAGGCCTGCAGCGCTCAGAGAAGAATACAGAGAAAATTGAAGTTTCTGGGGCCAAAATCACGAGAAGAAGAGCGTTGGCAGATGTGAGTAACGTCCGAGCCAACTCTTCTAGGAAAACAATTCAAGATGGCTCCAAGCATAAGATTTCAACTGGGACTAGAGCTAGCACTGCTGGCGTCAATGTCTCATTTAGGAAACCATTGGGAAAAACGAAGAATACAGGAGAAGCTGTGGGTGAATTGCATGCTTCAGAAAAAGGGCGTGTTAATGATTCAAATGGTTGTTCCGTCTATGAAAGAAACAAAACAGACGGTCCCTGCTGTGCCAATACTGTAAATACCAGTCAAGATGACGTACAACTGAATCATATTGGTTGTTTGTCTCTTGTTTTGAAGGATATCTTTACCAGTGCTAAGGAGGATGAACCAAGCAAATGCTTCGAACCCAAAGCTAAATCTGGCAAGAATGCAGTAGCCCCGGCAAAAAATATCAGAAGTCGGCTATGGAATAACCGAGTGAGCGATGGCTTCATCATAATGGGTCAAGCCAAGGTGGACACAAATACACTGTCCAAAAAGTCTAGTAAGCCCATTGCAAGGATCATGAAGAAGGCTTCTGGTACTCAAGAGGCATCAAAAGCCAAATATGCATCTGTTGCAATCAAATCAATTTCTAGTACTGCATCATCATCCAAGATTGTGGAACCCTCAGCATCTCTTTGTGAGGATATAACTAATATGTCCATTCAAGGGAGTGATGCATCTGAACCTACTTGTAATCCAAGTACAAGCACGGATTTGATTGTCAGGAAAAAAGTTGGTCGTAGGAGATCGTATACATCCTTGTTGGTCGCTGGAGCAAAGTTGCTGGATAAATGTGCTGTAGCTACGGAGATGGCTAACCTACCAAGTATTGACAATGACCACAACCAAATGGAGGTTGCTGAATACGTTGAGGAGATATATCGTTATTATTGGGTTACAGAGGTACACTTCAAATTTGACTTGATGCCTGAAACACTATTTCTCACTGTTACATTGTTTGATCGGTATCTCTCCCAAGTCATAATCAAGAAGAATGAAATGCAGTTGGTTGGTCTTACTGCATTGCTATTGGCATCGAAATATGAAGATTTTTGGCATCCTAGGGTTAAAGATCTAATTAGCATTTCAGCTGAGTCCTACTCAAGAGAGCAAGTGCTACAAATGGAAGCACTCATTCTTAAGAAGTTGAAGTTTCGCTTGAACATGCCTACTCCATATGTTTTTATGTTAAGATTTCTCAAGGCTGCTCAGTCTAATACTCAGCTTGAACACTTAACATTTTACTTGATTGAGCTGGCCTTGGTTGAATACGAAGCTCTTAGTTTCAAGCCGTCGTTGCTATGTGCATCGGCCCTATATGTTGCACGGTGTACGTTGCAAATAAGTCCATGCTGGACCGCACTACTAAACAAACATACACGCTACGAAGCGTCCCAAATAAGAGAATGTGCTGAGAAAATCTTGAAATTTCACCAATCTGCTCATTTGGGACAGCTGAAAGTCACGTATGAGAAGTACATGAAACCTGGTTTTAGCCGTGTTGCGACTCTAAAGCCATTGGACAAGCTTCCTCTTTGA 1812 42.33 MVATKAKVCLDAGLPTEDNRTRRSAMGGFKVYTEKDKIKADSSCKKPVTMKKEPSTDCVNQPKGGLQRSEKNTEKIEVSGAKITRRRALADVSNVRANSSRKTIQDGSKHKISTGTRASTAGVNVSFRKPLGKTKNTGEAVGELHASEKGRVNDSNGCSVYERNKTDGPCCANTVNTSQDDVQLNHIGCLSLVLKDIFTSAKEDEPSKCFEPKAKSGKNAVAPAKNIRSRLWNNRVSDGFIIMGQAKVDTNTLSKKSSKPIARIMKKASGTQEASKAKYASVAIKSISSTASSSKIVEPSASLCEDITNMSIQGSDASEPTCNPSTSTDLIVRKKVGRRRSYTSLLVAGAKLLDKCAVATEMANLPSIDNDHNQMEVAEYVEEIYRYYWVTEVHFKFDLMPETLFLTVTLFDRYLSQVIIKKNEMQLVGLTALLLASKYEDFWHPRVKDLISISAESYSREQVLQMEALILKKLKFRLNMPTPYVFMLRFLKAAQSNTQLEHLTFYLIELALVEYEALSFKPSLLCASALYVARCTLQISPCWTALLNKHTRYEASQIRECAEKILKFHQSAHLGQLKVTYEKYMKPGFSRVATLKPLDKLPL 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8690452 8696381 - Cp4.1LG15g09150.1 Cpe15g00905 482363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00905 603 SMART Cyclin_C_2 481 598 IPR004367 -
Cpe15g00905 603 PIRSF Cyclin_A_B_D_E 43 187 IPR039361 -
Cpe15g00905 603 PIRSF Cyclin_A_B_D_E 195 388 IPR039361 -
Cpe15g00905 603 PIRSF Cyclin_A_B_D_E 389 602 IPR039361 -
Cpe15g00905 603 Pfam Cyclin, C-terminal domain 481 597 IPR004367 -
Cpe15g00905 603 PANTHER CYCLIN-B3-1-RELATED 198 600 - -
Cpe15g00905 603 PANTHER CYCLINS 198 600 IPR039361 -
Cpe15g00905 603 MobiDBLite consensus disorder prediction 100 119 - -
Cpe15g00905 603 SUPERFAMILY Cyclin-like 373 479 IPR036915 -
Cpe15g00905 603 CDD CYCLIN 387 471 IPR013763 -
Cpe15g00905 603 SUPERFAMILY Cyclin-like 480 600 IPR036915 -
Cpe15g00905 603 Gene3D - 473 602 - -
Cpe15g00905 603 CDD CYCLIN 481 566 IPR013763 -
Cpe15g00905 603 SMART cyclin_7 485 567 IPR013763 -
Cpe15g00905 603 SMART cyclin_7 388 472 IPR013763 -
Cpe15g00905 603 Gene3D - 375 472 - -
Cpe15g00905 603 Pfam Cyclin, N-terminal domain 365 479 IPR006671 -
Cpe15g00905 603 MobiDBLite consensus disorder prediction 43 70 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00905 Cpe-Chr15:8690452 Cpe19g00245 Cpe-Chr19:2004731 1.74E-61 dispersed
Cpe15g00905 Cpe-Chr15:8690452 Cpe02g00037 Cpe-Chr2:201461 3.19E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00905 K21777 - csv:101213908 886.715