Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00910 ATGTTCCATCCTAATAAGAAAGCTTCGAGTATGAATTCCCACGAGAGATCAGGGATGTGCGTTCAAGGCGACTCCGGCCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGCTGGACTGTCGAGCTTCACGAGCGCTTTGTCGATGCTGTCACCCAGCTCGGCGGCCCTGATAAGGCCACCCCCAAGACCATCATGCGAGTTATGGGTGTCAAGGGTCTTACTCTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGACTGGGAAAGCAGCCTCACAAGGAATTCAATGATCATTCAATCAAGGATGGTATGAGAGATAGTGATGATATTTGTAGTGGTAACTCACACATGGTTGATGCGATTAGGATGCAAATGGAGGTCCAGAGAAGATTGCATGAACAACTTGAGGTGCAAAGACACCTGCAGTTGCGGATCGAGGCACAAGGGAAGTATATGCAGAATATATTAGAAAAGGCTTGTCAAACCCTTGCGGGTGAGAACATGGCAGTTTCCGGCGGCTACAAGGCCATGGGGGGCATCCCTAATAATAATAATCAGCAAGGCGGAGGCGGCGGTGGCATTGGCGACATGGCCGGAGGGATCAAAGATTTTGGCTCCCCTCTCGGCTTCCCTTCTTTTCAAGACCTGAACCTCTATGGAGGCGACCAGCTTGATCTTGATGGATTCATGCCTCACAACGACAGCTTACTGTGCTTGGGAAAGAAGAAGCCGAGACCGCCAACACCGACAACGAACTACGGCGGCAGCTCGGGAAAAGGTGCGTTGGACTGGCCGGATGATCTCCGGCTGCAAGATATAGGTATGGCGCCGCCGTCGTCGTGTGTGGTGGAGCAAGAAGATGATTTCAAAGGCATGGATGGGACGCTGGTGGAAAGAGATCAATTGGAGGAAATGTATGATGCAAAGTCAGTGGTGGCAGATGAAGGCATAGGGGGGGATCACAAGAACAACAACAACAACAACGATGATAATAATAATAATAATAATAATAATAATAATAATGCGTCCCTAAAGCTTCAGAGGCCATCCCCCCGAAGGGCAGCCCTGGCCGTGGGTAGAGCCAACCACCCTCTTACCACCGCTCCTCTCACCACAAATTCACCCTTCGGTTAA 1137 50.84 MFHPNKKASSMNSHERSGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRDSDDICSGNSHMVDAIRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQNILEKACQTLAGENMAVSGGYKAMGGIPNNNNQQGGGGGGIGDMAGGIKDFGSPLGFPSFQDLNLYGGDQLDLDGFMPHNDSLLCLGKKKPRPPTPTTNYGGSSGKGALDWPDDLRLQDIGMAPPSSCVVEQEDDFKGMDGTLVERDQLEEMYDAKSVVADEGIGGDHKNNNNNNDDNNNNNNNNNNNASLKLQRPSPRRAALAVGRANHPLTTAPLTTNSPFG 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8713480 8716141 + Cp4.1LG15g09040.1 Cpe15g00910 482368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00910 378 Pfam MYB-CC type transfactor, LHEQLE motif 118 163 IPR025756 -
Cpe15g00910 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 1 276 - -
Cpe15g00910 378 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 34 89 IPR006447 GO:0003677
Cpe15g00910 378 MobiDBLite consensus disorder prediction 1 19 - -
Cpe15g00910 378 MobiDBLite consensus disorder prediction 321 348 - -
Cpe15g00910 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 91 IPR017930 -
Cpe15g00910 378 MobiDBLite consensus disorder prediction 1 27 - -
Cpe15g00910 378 MobiDBLite consensus disorder prediction 239 262 - -
Cpe15g00910 378 Pfam Myb-like DNA-binding domain 37 85 IPR001005 -
Cpe15g00910 378 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Cpe15g00910 378 MobiDBLite consensus disorder prediction 314 356 - -
Cpe15g00910 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 276 IPR044848 GO:0003700
Cpe15g00910 378 Gene3D - 33 91 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01028 Cpe15g00910 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01593 Cpe-Chr3:12298519 Cpe15g00910 Cpe-Chr15:8713480 3.45E-66 dispersed
Cpe05g01028 Cpe-Chr5:6737489 Cpe15g00910 Cpe-Chr15:8713480 9.66E-90 dispersed
Cpe08g00397 Cpe-Chr8:2528331 Cpe15g00910 Cpe-Chr15:8713480 8.85E-09 dispersed
Cpe10g00725 Cpe-Chr10:4143111 Cpe15g00910 Cpe-Chr15:8713480 4.40E-48 dispersed
Cpe11g00707 Cpe-Chr11:5160744 Cpe15g00910 Cpe-Chr15:8713480 7.75E-51 dispersed
Cpe15g00178 Cpe-Chr15:1452963 Cpe15g00910 Cpe-Chr15:8713480 6.16E-48 dispersed
Cpe15g00910 Cpe-Chr15:8713480 Cpe19g00909 Cpe-Chr19:6603590 2.23E-48 dispersed
Cpe15g00910 Cpe-Chr15:8713480 Cpe16g00703 Cpe-Chr16:7223288 2.48E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50661 PF00249 Myb_DNA-binding 2.10E-06 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00910 - - cpep:111811117 674.855