Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00917 CACCCGCCGCCCCAGAGAGAGAAGCAAGGGAGGCACAGGAAGCCAGGAGGGAAAACTGCTTACATACTCCAACTATTGGATTTTAAGAACCTGAGGAATATGAAGTACGTATTGGTTACGGGAGGTGTTGTTAGTGGACTGGGCAAAGGGGTCACTGCTAGCAGTATCGGAGTCCTCCTTAAAGCTTGCGGTCTTCGAGTTACTTCCATTAAGATTGATCCTTATCTAAATACAGATGCTGGTACCATGTCTCCTTTTGAGCACGGCGAAGTGTTCGTCTTGGATGACGGTGGTGAGGTTGACCTGGACCTTGGAAACTATGAACGATTTTTGGACATCACACTAACTCGTGATAACAACATCACAACCGGAAAAATATACCAGTCTGTGATTGACAAGGAGAGAAGAGGTGATTACCTGGGAAAGACTGTTCAGGTTGTTCCACACATTACAGATGCTATCCAAGAATGGATTGAGCGTGTAGCAATGATACCAGTTGATAGTAAAGAAGGTCCAGCTGATGTGTGTGTAATTGAATTGGGTGGCACCATAGGAGATATTGAATCGATGCCATTTATTGAAGCACTTGGCCAATTTTCGTACCGCGTAGGTCCTGGAAATTTCTGCTTGGTTCATGTTAGCCTTGTTCCGGTCCTCAATGTAGTTGGTGAACAGAAAACTAAGCCTACTCAACACAGTGTTCGAGGTCTAAGAGGACTGGGATTGGTCCCAAATATTTTAGCTTGCCGCAGTTCAAAGGCAGAGAATATAATCACTCTCTATGATGTGCCAAATATTTGGCATATTCCTCTGCTATTAAGAGACCAGAAGGCTCATAATGCACTCTTAAAAGGACTGAATCTTCACAGTGTAGCAGGAGAACCAGATTTAGATGAATGGACGTCTAGGACAAGGTTATATGATAAGTTACATGATTCCGTCAAAATTGCTATGGTTGGTAAATACACAGGCCTTTCAGATTCGTACCTCTCTGTGTTAAAGGCCCTTCTACATGCTTCTGTCGTCAGCAATAGAAAGCTTACTGTAGAATGGGTTCCAGCTGGGGATCTTGAAGATATTTCTGCCAAAGAGGCCCCCGAGGTTTATGCAGCTGCGTGGGAACTTTTAAAGGGTGCTGACGGTGTTCTAGTTCCAGGAGGTTTTGGTGATAGGGGAGTACAAGGGAAAATTCTAGCAGCCAAATATGCCCGAGAGAATGGGATTCCCTTTCTAGGCATATGCCTGGGGATGCAAATTGCTGTCATTGAATTTTCCAGGTCTGTTCTTGGTATACATGATGCTAACAGCACAGAGTTCGATCCTGAAACCGCAAACCCTTGTGTGGTTTTTATGCCTGAGGGTTCAAAGACTCATATGGGAGGAACTATGCGTTTAGGGTCAAGGAGAACTTACTTTAATGTTATGGACTGCAAATCTGCAAAGTTGTATGGCAATGTAAAGTTTGTTGATGAGCGACATAGGCATAGATATGAGGTCAATCCTGATATGGTGTGTCAACTTGAAAATGCCGGTTTATCTTTTGTTGGCAGTGATGAAACAGGTCGTCGTATGGAGATTGTCGAGTTAGATGCCCATCCATACTTCGTGGGAGTTCAGTTTCATCCTGAATTTAAGTCCAGACCAGGGAAACCCTCCCCGCTCTTTTTAGGGCTCATTAAGGCAGCATGTGGCCAATTAGACGCCTTTCTACAAAAAAATGGAAGTGTAAGCCAATTTTCGGCAGACACAACAAGCAATGGACACGCCAAGATAAAGATTCTGCAAAATGGACACTCCCCGAAGTCAGGGAATGGGTTATTGAATGCTGCATATGGCAATGCAGTAGTTTGCCCTTGGAAGGATGTCAACCACTGTTAA 1878 44.25 HPPPQREKQGRHRKPGGKTAYILQLLDFKNLRNMKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDITLTRDNNITTGKIYQSVIDKERRGDYLGKTVQVVPHITDAIQEWIERVAMIPVDSKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRGLRGLGLVPNILACRSSKAENIITLYDVPNIWHIPLLLRDQKAHNALLKGLNLHSVAGEPDLDEWTSRTRLYDKLHDSVKIAMVGKYTGLSDSYLSVLKALLHASVVSNRKLTVEWVPAGDLEDISAKEAPEVYAAAWELLKGADGVLVPGGFGDRGVQGKILAAKYARENGIPFLGICLGMQIAVIEFSRSVLGIHDANSTEFDPETANPCVVFMPEGSKTHMGGTMRLGSRRTYFNVMDCKSAKLYGNVKFVDERHRHRYEVNPDMVCQLENAGLSFVGSDETGRRMEIVELDAHPYFVGVQFHPEFKSRPGKPSPLFLGLIKAACGQLDAFLQKNGSVSQFSADTTSNGHAKIKILQNGHSPKSGNGLLNAAYGNAVVCPWKDVNHC 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8797513 8804468 + Cp4.1LG15g09100.1 Cpe15g00917 482375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00917 625 SUPERFAMILY Class I glutamine amidotransferase-like 313 565 IPR029062 -
Cpe15g00917 625 TIGRFAM PyrG: CTP synthase 33 561 IPR004468 GO:0003883|GO:0006221
Cpe15g00917 625 PANTHER CTP SYNTHASE 34 585 - -
Cpe15g00917 625 Pfam CTP synthase N-terminus 35 288 IPR017456 GO:0003883|GO:0006221
Cpe15g00917 625 Gene3D - 311 577 IPR029062 -
Cpe15g00917 625 CDD CTPS_N 35 284 IPR017456 GO:0003883|GO:0006221
Cpe15g00917 625 Gene3D - 26 308 IPR027417 -
Cpe15g00917 625 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 315 568 - -
Cpe15g00917 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 288 IPR027417 -
Cpe15g00917 625 CDD GATase1_CTP_Synthase 314 559 IPR033828 GO:0003883|GO:0006241
Cpe15g00917 625 PANTHER CTP SYNTHASE 34 585 IPR004468 GO:0003883|GO:0006221
Cpe15g00917 625 Pfam Glutamine amidotransferase class-I 325 561 IPR017926 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00917 Cpe-Chr15:8797513 Cpe19g01221 Cpe-Chr19:8220034 0 dispersed
Cpe15g00917 Cpe-Chr15:8797513 Cpe12g00903 Cpe-Chr12:7818567 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00917 K01937 - csv:101213614 1094.72