Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00059 ATGGACCTCTCTTCCCTCCCCTCCAAAGACACCACTTGGTGGCTCTTCACCCTCCCTCACTTCCTCCCCTCCCAATTCTCTCCGCTCCTCCTCCTCCTCGCCTTTCTCTCCCTCGCCTTCCTCTCCGCCCTTCTCGCCACCGCCGGCACTGCCTGGCCCAATGGAAGGAACCATAGAGGCCAACGTCCCATCCCCGGCGCCCGCGGCCTTCCAATTCTCGGCAGCTTGTTCTCTCTCACCCACGGCCTACCCCACCGGACTCTGGCTGCCATGGCTGCAGCCAGAGGCAGCCCTCAGCTAATGGCCTTCAGTCTAGGTTCCACCCCTGTTGTGGTTACCTCCGACCCTCATACAGCAAAGGAGATTCTAACCTCACCCCACTTCGCTAACCGCCCTCTCAAGCAGTCCGCCAAGAGTCTAATGTTCGGGCGAGCCATAGGGTTCGCCCCAAACGGCATCTACTGGCGTCTACTGAGGCGAATCGCATCGACCCACTTATTCTCTCCCAAACGTATCGCCGCCCACGAACCCGCTCGCCAGCTCGAATGCGCCGCCATGTTACAAACCATTCACAACCAACAAACCCTTCACGGAGCCGTTTCCTTACGAAAACACCTCCAAGCCGCTGCCTTGAACAACGTGATGTGGAGCGTATTTGGAAAGCGGTTCGACCCGACCGATTCCAAATTAGAAACGGTTCGCGAGTTGGTTCGTGAAGGGTTCGAGCTGCTCGGTGCGTTTAATTGGTCGGATTATCTCCCCTGGCTTAGTGGATTCTACGACCCGGGTCGTATCCGCCACCGCTGCGCCCAACTCGTCCCTAAAGTTAATGAATTTGTCCGCGGCGTAATTGATGAGCACCGCCGCGGTCAAGCTCCGTCGGATGATTCCGATTTCGTCGACGTTTTGCTGTCTCTCGACGGCGATGAAAAGCTCAACGAGGATGACATGGTGGCTGTCTTATGGGAAATGATTTTCCGGGGTACGGACACGACGGCGCTGCTGACGGAGTGGGTGGTGGCGGAGTTAATTTTACATCCGGAGATACAGGGAGAAGTCGCGAGGGAAATCGCCACCGCTGTGGACGGAAGTAACCTCTCAGACGCTGACGTGGCGAATCTGCCGTACTTACAGGCGGTGGTGAAGGAGACGCTGCGGCTACACCCACCAGGTCCACTACTCTCGTGGGCCCGCCTCTCTTCGTCGGATGTCCACCTAAGCAACGGCATGCTTATCCCAGAGAACACAACCGCCATGGTCAACATGTGGGCCATAACGCACGACCCCCACGTATGGGAAGATCCACACGTGTTCAAGCCAGGGAGGTTCGTGGGTGCTGAGGTGGACATCAGAGGGTGCGACCTCCGACTAGCGCCGTTCGGAGCAGGGCGGAGGGTGTGCCCAGGGAAGAATCTGGGGCTGGTGACTGTCACACTGTGGGTGGCTAAGCTGGTCCATCACTTCAAATGGGGTCCGGACCCAGCCGCCCCAGTGGAGCTGAGTGAGGTGCTGAAGCTCTCGTGTGAGATGAAGCATCCTCTAAGTGCGGTGGCAGTGACAAGAAATGGATTTTAG 1575 57.97 MDLSSLPSKDTTWWLFTLPHFLPSQFSPLLLLLAFLSLAFLSALLATAGTAWPNGRNHRGQRPIPGARGLPILGSLFSLTHGLPHRTLAAMAAARGSPQLMAFSLGSTPVVVTSDPHTAKEILTSPHFANRPLKQSAKSLMFGRAIGFAPNGIYWRLLRRIASTHLFSPKRIAAHEPARQLECAAMLQTIHNQQTLHGAVSLRKHLQAAALNNVMWSVFGKRFDPTDSKLETVRELVREGFELLGAFNWSDYLPWLSGFYDPGRIRHRCAQLVPKVNEFVRGVIDEHRRGQAPSDDSDFVDVLLSLDGDEKLNEDDMVAVLWEMIFRGTDTTALLTEWVVAELILHPEIQGEVAREIATAVDGSNLSDADVANLPYLQAVVKETLRLHPPGPLLSWARLSSSDVHLSNGMLIPENTTAMVNMWAITHDPHVWEDPHVFKPGRFVGAEVDIRGCDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWGPDPAAPVELSEVLKLSCEMKHPLSAVAVTRNGF 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 829107 831178 + Cp4.1LG16g00040.1 Cpe16g00059 482434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00059 524 SUPERFAMILY Cytochrome P450 64 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PANTHER CYTOCHROME P450 78A7-RELATED 7 523 - -
Cpe16g00059 524 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Cpe16g00059 524 Pfam Cytochrome P450 65 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 Gene3D Cytochrome P450 54 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00059 524 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 7 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00059 Cpe-Chr16:829107 Cpe20g00084 Cpe-Chr20:447622 1.64E-164 dispersed
Cpe16g00059 Cpe-Chr16:829107 Cpe12g00430 Cpe-Chr12:3286711 5.65E-167 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00059 K20619 - csv:101214099 764.607