Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00065 GATGGGTCAAGAAAACAGTTCACATGCGGCCCTCATTTACAGAAAGAACTCTGTTCTGTGCTCAAAAAACTGCGCCTCAAATTTTGGGGGGAAACAATGGCGAAATCACCGGAAGATGAACATCCACACAAGGCTTTTGGTTGGGCTGCTCGAGATTCTTCCGGCTTACTCTCCCCTTTCCGTTTCTCTCGAAGGGAAAATGGTGATGATGATGTCTCTATCAAAATCCTTTACTGTGGGGTTTGCCACTCTGATTTGCATATGCTCAAGAATGACTGGGGGGCCACAGATTATCCTATAGTCCCTGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGAAAAAATGTGAAGAAATTCAAAGCAGGCGATGAAGTTGGGGTTGGTGTCATTGTTGGATCTTGTAGAAACTGTGAAAATTGTAAACAAGACTTGGAGAGTTACTGTCCCAAGATGGAATATACATACAATTCTCCTGCAATCGATGGATCGAAGAATTACGGTGGCTATTCCGACAAGATCGTCGTCGATCAACATTTTGTTGTTCGATTTCCTAAGAACTTAGCTCTTGATGCTGGGGCTCCTCTCCTATGTGCTGGAATTACTGTTTATAGTCCAATGAAATATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGCGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTTATTAGTACCTCTCCTAGGAAGAAGGAGGAAGCAATCGACAGGCTCGGGGCTGATGCTTTCGTTGTATCGAGTGATCCCGATCAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCTGCTGTTCATGCTCTTGATCCATTGATTAGTCTGCTAAACCTCAACGGAAAGTTGGTCGCGGTCGGGTTACCTAACAAACCAGTTGAACTATCGCTCGGGTTCCTAGTCTCTGGAAGGAGATTGATTGCTGGAAGCAACTTTGGTGGACTGAAAGAGACACAAGAGATGTTGGATTTCTGTGGAAAACACAACATTACAGCTGATATTGAGCTCATTAAGATGGATGACATTAACTCAGCTATCGAAAGGCTCGGGAAAGCTGATGTTAAATATCGGTTCGTGATCGACATCGTAAACTCGTTCAAATCGACGGCTTTTGGATGGGCTGCCCGAGATACATCCGGATTACTCTCTCCATTTCATTTCTCTCGAAGATCTAATGGTGCTGATGATGTGAGCATCAAAATCCTTTACTGTGGGGTTTGCCATTCTGATCTGCACTTGCTCAAGAATGATTGGGGTATCACAAATTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACCTCTGTTGGGAATAATGTGAAGAAATTCAAAGCGGGCGATCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAAAAGTTGTGAGAATTGTGATCAGGACTTGGAGAGTTACTGCCCCAAGTTGATATATACTTACAACTCACATTCATATGATGGAGTGAAGAATTATGGTGGTTATTCTGATAAGATCGTCGTCAATCAGCATTTCGTGCTCCGATTTCCCGACAACTTACCTCTTGATGCTGGAGCTCCACTTCTTTGTGCTGGAATCACAGTTTATAGTCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATATGGGTGTGGTTGGACTTGGTGGTCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACTTCTCCAAGAAAGAAGGAGGAGGCCATCGACAGGCTCGGTGCTGATGCTTTTCTTGCTGCCATGGGGACGATGGATTATATTATCGACACTGTATCCGCTATCCATGCTCTTGCTCCGTTGCTCAGCCTGCTAAAGCTGAATGGAAAGTTGGTCACTGTGGGTTTGCCTAACAAGCCTCTAGAGCTGCCAGTTGTTTCTCTAGTTCTCGGCAGGAGGATGGTTGGCGGTAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTAAGAACAACATCACTGCAGATATTGAACTCATTCAGATGGACAACATTAACTCGGCCATCGAAAGGCTTGCAAAAGCTGATGTTCGATATCGGTTTGTGATCGACATCGGAAACTCCTTCAAATAG 2190 44.2 DGSRKQFTCGPHLQKELCSVLKKLRLKFWGETMAKSPEDEHPHKAFGWAARDSSGLLSPFRFSRRENGDDDVSIKILYCGVCHSDLHMLKNDWGATDYPIVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRNCENCKQDLESYCPKMEYTYNSPAIDGSKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMKYFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPDQLKAAMGTMDYILDTISAVHALDPLISLLNLNGKLVAVGLPNKPVELSLGFLVSGRRLIAGSNFGGLKETQEMLDFCGKHNITADIELIKMDDINSAIERLGKADVKYRFVIDIVNSFKSTAFGWAARDTSGLLSPFHFSRRSNGADDVSIKILYCGVCHSDLHLLKNDWGITNYPIVPGHEIVGVVTSVGNNVKKFKAGDQVGVGVIVGSCKSCENCDQDLESYCPKLIYTYNSHSYDGVKNYGGYSDKIVVNQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTESGKHMGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFLAAMGTMDYIIDTVSAIHALAPLLSLLKLNGKLVTVGLPNKPLELPVVSLVLGRRMVGGSNFGGLKETQEMLDFCAKNNITADIELIQMDNINSAIERLAKADVRYRFVIDIGNSFK 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1275558 1283805 - Cp4.1LG16g00690.1 Cpe16g00065 482440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00065 729 Gene3D - 547 694 - -
Cpe16g00065 729 Gene3D - 199 355 - -
Cpe16g00065 729 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 190 353 IPR036291 -
Cpe16g00065 729 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 43 390 - -
Cpe16g00065 729 PANTHER ALDEHYDE REDUCTASE 43 390 - -
Cpe16g00065 729 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 536 692 IPR036291 -
Cpe16g00065 729 CDD CAD1 46 384 - -
Cpe16g00065 729 SUPERFAMILY GroES-like 402 565 IPR011032 -
Cpe16g00065 729 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 451 465 IPR002328 GO:0008270|GO:0016491
Cpe16g00065 729 SUPERFAMILY GroES-like 53 217 IPR011032 -
Cpe16g00065 729 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 103 117 IPR002328 GO:0008270|GO:0016491
Cpe16g00065 729 CDD CAD1 394 723 - -
Cpe16g00065 729 Gene3D - 48 385 - -
Cpe16g00065 729 PANTHER ALDEHYDE REDUCTASE 391 728 - -
Cpe16g00065 729 Pfam Zinc-binding dehydrogenase 226 347 IPR013149 -
Cpe16g00065 729 Pfam Zinc-binding dehydrogenase 574 688 IPR013149 -
Cpe16g00065 729 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 391 728 - -
Cpe16g00065 729 Gene3D - 396 724 - -
Cpe16g00065 729 Pfam Alcohol dehydrogenase GroES-like domain 418 530 IPR013154 -
Cpe16g00065 729 Pfam Alcohol dehydrogenase GroES-like domain 70 183 IPR013154 -
Cpe16g00065 729 SMART PKS_ER_names_mod 55 383 IPR020843 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00421 Cpe-Chr1:2441840 Cpe16g00065 Cpe-Chr16:1275558 1.13E-107 dispersed
Cpe10g00530 Cpe-Chr10:3105169 Cpe16g00065 Cpe-Chr16:1275558 3.97E-152 dispersed
Cpe14g00281 Cpe-Chr14:1642661 Cpe16g00065 Cpe-Chr16:1275558 3.16E-106 dispersed
Cpe16g00065 Cpe-Chr16:1275558 Cpe06g00889 Cpe-Chr6:5938078 2.22E-16 dispersed
Cpe02g00059 Cpe-Chr2:305614 Cpe16g00065 Cpe-Chr16:1275558 1.28E-127 transposed
Cpe05g00755 Cpe-Chr5:4663821 Cpe16g00065 Cpe-Chr16:1275558 1.06E-101 transposed
Cpe16g00065 Cpe-Chr16:1275558 Cpe05g01099 Cpe-Chr5:7330666 4.44E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00065 K00083 - tss:122651163 920.998