Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00065 | GATGGGTCAAGAAAACAGTTCACATGCGGCCCTCATTTACAGAAAGAACTCTGTTCTGTGCTCAAAAAACTGCGCCTCAAATTTTGGGGGGAAACAATGGCGAAATCACCGGAAGATGAACATCCACACAAGGCTTTTGGTTGGGCTGCTCGAGATTCTTCCGGCTTACTCTCCCCTTTCCGTTTCTCTCGAAGGGAAAATGGTGATGATGATGTCTCTATCAAAATCCTTTACTGTGGGGTTTGCCACTCTGATTTGCATATGCTCAAGAATGACTGGGGGGCCACAGATTATCCTATAGTCCCTGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGAAAAAATGTGAAGAAATTCAAAGCAGGCGATGAAGTTGGGGTTGGTGTCATTGTTGGATCTTGTAGAAACTGTGAAAATTGTAAACAAGACTTGGAGAGTTACTGTCCCAAGATGGAATATACATACAATTCTCCTGCAATCGATGGATCGAAGAATTACGGTGGCTATTCCGACAAGATCGTCGTCGATCAACATTTTGTTGTTCGATTTCCTAAGAACTTAGCTCTTGATGCTGGGGCTCCTCTCCTATGTGCTGGAATTACTGTTTATAGTCCAATGAAATATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGCGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTTATTAGTACCTCTCCTAGGAAGAAGGAGGAAGCAATCGACAGGCTCGGGGCTGATGCTTTCGTTGTATCGAGTGATCCCGATCAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCTGCTGTTCATGCTCTTGATCCATTGATTAGTCTGCTAAACCTCAACGGAAAGTTGGTCGCGGTCGGGTTACCTAACAAACCAGTTGAACTATCGCTCGGGTTCCTAGTCTCTGGAAGGAGATTGATTGCTGGAAGCAACTTTGGTGGACTGAAAGAGACACAAGAGATGTTGGATTTCTGTGGAAAACACAACATTACAGCTGATATTGAGCTCATTAAGATGGATGACATTAACTCAGCTATCGAAAGGCTCGGGAAAGCTGATGTTAAATATCGGTTCGTGATCGACATCGTAAACTCGTTCAAATCGACGGCTTTTGGATGGGCTGCCCGAGATACATCCGGATTACTCTCTCCATTTCATTTCTCTCGAAGATCTAATGGTGCTGATGATGTGAGCATCAAAATCCTTTACTGTGGGGTTTGCCATTCTGATCTGCACTTGCTCAAGAATGATTGGGGTATCACAAATTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACCTCTGTTGGGAATAATGTGAAGAAATTCAAAGCGGGCGATCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAAAAGTTGTGAGAATTGTGATCAGGACTTGGAGAGTTACTGCCCCAAGTTGATATATACTTACAACTCACATTCATATGATGGAGTGAAGAATTATGGTGGTTATTCTGATAAGATCGTCGTCAATCAGCATTTCGTGCTCCGATTTCCCGACAACTTACCTCTTGATGCTGGAGCTCCACTTCTTTGTGCTGGAATCACAGTTTATAGTCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATATGGGTGTGGTTGGACTTGGTGGTCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACTTCTCCAAGAAAGAAGGAGGAGGCCATCGACAGGCTCGGTGCTGATGCTTTTCTTGCTGCCATGGGGACGATGGATTATATTATCGACACTGTATCCGCTATCCATGCTCTTGCTCCGTTGCTCAGCCTGCTAAAGCTGAATGGAAAGTTGGTCACTGTGGGTTTGCCTAACAAGCCTCTAGAGCTGCCAGTTGTTTCTCTAGTTCTCGGCAGGAGGATGGTTGGCGGTAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTAAGAACAACATCACTGCAGATATTGAACTCATTCAGATGGACAACATTAACTCGGCCATCGAAAGGCTTGCAAAAGCTGATGTTCGATATCGGTTTGTGATCGACATCGGAAACTCCTTCAAATAG | 2190 | 44.2 | DGSRKQFTCGPHLQKELCSVLKKLRLKFWGETMAKSPEDEHPHKAFGWAARDSSGLLSPFRFSRRENGDDDVSIKILYCGVCHSDLHMLKNDWGATDYPIVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRNCENCKQDLESYCPKMEYTYNSPAIDGSKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMKYFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPDQLKAAMGTMDYILDTISAVHALDPLISLLNLNGKLVAVGLPNKPVELSLGFLVSGRRLIAGSNFGGLKETQEMLDFCGKHNITADIELIKMDDINSAIERLGKADVKYRFVIDIVNSFKSTAFGWAARDTSGLLSPFHFSRRSNGADDVSIKILYCGVCHSDLHLLKNDWGITNYPIVPGHEIVGVVTSVGNNVKKFKAGDQVGVGVIVGSCKSCENCDQDLESYCPKLIYTYNSHSYDGVKNYGGYSDKIVVNQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTESGKHMGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFLAAMGTMDYIIDTVSAIHALAPLLSLLKLNGKLVTVGLPNKPLELPVVSLVLGRRMVGGSNFGGLKETQEMLDFCAKNNITADIELIQMDNINSAIERLAKADVRYRFVIDIGNSFK | 729 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 1275558 | 1283805 | - | Cp4.1LG16g00690.1 | Cpe16g00065 | 482440 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00065 | 729 | Gene3D | - | 547 | 694 | - | - | |
Cpe16g00065 | 729 | Gene3D | - | 199 | 355 | - | - | |
Cpe16g00065 | 729 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 190 | 353 | IPR036291 | - | |
Cpe16g00065 | 729 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 43 | 390 | - | - | |
Cpe16g00065 | 729 | PANTHER | ALDEHYDE REDUCTASE | 43 | 390 | - | - | |
Cpe16g00065 | 729 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 536 | 692 | IPR036291 | - | |
Cpe16g00065 | 729 | CDD | CAD1 | 46 | 384 | - | - | |
Cpe16g00065 | 729 | SUPERFAMILY | GroES-like | 402 | 565 | IPR011032 | - | |
Cpe16g00065 | 729 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 451 | 465 | IPR002328 | GO:0008270|GO:0016491 | |
Cpe16g00065 | 729 | SUPERFAMILY | GroES-like | 53 | 217 | IPR011032 | - | |
Cpe16g00065 | 729 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 103 | 117 | IPR002328 | GO:0008270|GO:0016491 | |
Cpe16g00065 | 729 | CDD | CAD1 | 394 | 723 | - | - | |
Cpe16g00065 | 729 | Gene3D | - | 48 | 385 | - | - | |
Cpe16g00065 | 729 | PANTHER | ALDEHYDE REDUCTASE | 391 | 728 | - | - | |
Cpe16g00065 | 729 | Pfam | Zinc-binding dehydrogenase | 226 | 347 | IPR013149 | - | |
Cpe16g00065 | 729 | Pfam | Zinc-binding dehydrogenase | 574 | 688 | IPR013149 | - | |
Cpe16g00065 | 729 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 391 | 728 | - | - | |
Cpe16g00065 | 729 | Gene3D | - | 396 | 724 | - | - | |
Cpe16g00065 | 729 | Pfam | Alcohol dehydrogenase GroES-like domain | 418 | 530 | IPR013154 | - | |
Cpe16g00065 | 729 | Pfam | Alcohol dehydrogenase GroES-like domain | 70 | 183 | IPR013154 | - | |
Cpe16g00065 | 729 | SMART | PKS_ER_names_mod | 55 | 383 | IPR020843 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00421 | Cpe-Chr1:2441840 | Cpe16g00065 | Cpe-Chr16:1275558 | 1.13E-107 | dispersed | |
Cpe10g00530 | Cpe-Chr10:3105169 | Cpe16g00065 | Cpe-Chr16:1275558 | 3.97E-152 | dispersed | |
Cpe14g00281 | Cpe-Chr14:1642661 | Cpe16g00065 | Cpe-Chr16:1275558 | 3.16E-106 | dispersed | |
Cpe16g00065 | Cpe-Chr16:1275558 | Cpe06g00889 | Cpe-Chr6:5938078 | 2.22E-16 | dispersed | |
Cpe02g00059 | Cpe-Chr2:305614 | Cpe16g00065 | Cpe-Chr16:1275558 | 1.28E-127 | transposed | |
Cpe05g00755 | Cpe-Chr5:4663821 | Cpe16g00065 | Cpe-Chr16:1275558 | 1.06E-101 | transposed | |
Cpe16g00065 | Cpe-Chr16:1275558 | Cpe05g01099 | Cpe-Chr5:7330666 | 4.44E-140 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00065 | K00083 | - | tss:122651163 | 920.998 |