Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00093 ATGGGAGAGGTGATTAGCAAAAGAGAAGAAGACATGGATGAGCAGGCTTCGATAGCGAATAGCACAGATGATACAATCGTTTGCTATGCGCCTAGCATGATCACAACAAATGGGGTGTGGCAAGGCGATAACCCTCTTGATTATTCTCTCCCTCTCTTCATCTTACAGTTAACAATGGTGGTTGTGATGACTCGCACTTTGGGCGGAGTGATTTTGGGGCCTTCGGTTCTAGGGAGGAGTACAGATTTTGCCAACACCGTATTTCCTTTAAGAAGTGTAATGGTGCTTGAAACAATGGCCAACGTGGGGCTTCTCTACTTTTTGTTCTTGGTTGGTGTGGAGATGGATCTGTCAGTGATTCGTAGAACTGGGTCGAAGGCAATGGCAATAGCTGTAGCAGGAATGATTCTTCCATTCAGCATAGGAGCTGCCTTTTCATTCCAGTTGCACAAAACAGATGAGGAATTGAACATCACTTACATTATGTTTCTTGGTATTGCACTCTCCGTGACAGCTTTCCCAGTGCTAGCTAGAATTCTTGCAGAGCTTAAACTGATAAACTCAGAGATTGGAAGGATGGCTATGGCCTCTGCCCTTTTCAATGACATGTGTGCTTGGGTTCTCTTAGCTATAGCCATAGCCTTATCCGAGAATGATACCTCATCTATGGCTTCCTTATGGGTTATATTGTCAAGTACAGGCTTTGTTTTGTTTTGTATCTTCATCGTTCGACCCTTGATCTCGTGGATGATTCGAAAAACTCCAGAAGGGGAAAGTATCAGTGAGTTCTATATATGTTTGATCCTCACAGGGGTTATGATCTCAGGGTTTGTTACAGATGCCCTTGGAACACACTCGGTTTTTGGGGCTTTTGTGTTCGGGTTGGTTATCCCAAATGGATCACTTGGGGTTGCTTTAATTGAGAAACTTGAGGATTTTGTTTCAGGGCTTCTTCTCCCTCTCTTCTTTGCAATAAGTGGGCTTAAGACTAATGTGAATCGCATAGAAGGATCAACCTCTTGGGTAGCTATTCTATCAATCACGCTCCTTGCTTTTGCTGGAAAAATCATTGGAACTCTCCTTGCTTCCATTTGTTATCAGATGTCCTATCGAGAAGGTGTGTTGGATGATAAAACGTTCACAGTTATGGTGATTGTAGCCCTCTTTATGACTGGGATAATAACGCCTGTAGTTACCATAATCTATAGGCCAACAAGAAGGTTTCTACCGTATAAGAAACGAACAATCCAAGCATCGAAACCAGATTCAGAGTTCAGAGTATTAGTTTGCATCCACACACCTCGAAATGTGCCAACGATCATTAACCTTCTTGATGCCTCAAACCCAACCAAAAGATCCCCAATTTGCATTTACGTTCTACACTTGGTCGAACTCACAGGCCGAGCCTCTGCCATGCTCATTGTCCACAACACCAGAAAATCAGGTCGCCCTGCCCTAAATCGAACCCAAGCTCAATCAGATCACATCATCAATGCATTCGAGAACTACGAGCAACACGTCGAATGCATCTCAGTTCAGCCGCTCACAGCCATTTCCCCCTACTCCACAATGCACGAAGACATCTGCAATTTAGCCGAGGATAAACGTGTGGCCTTCATAATCATCCCATTCCACAAGCAACAAACAGTGGATGGAGGAATGGAAGCCACAAATCCAGCGTTTAGATTGGTAAACCAAAATGTGTTAGCCAATGCCCCTTGTTCCGTCGGAATCCTAGTGGATCGAGGCTTAAACGGCTCGAATCGAGTCGCATCGAACAAGGAATGTCACTATAACATAACCATGTTGTTCTTCGGTGGACAAGACGATAGAGAAGCCCTATCATACGCATGGAGAATGTCAGAACATCCGCGAGTAAGCTTAACCGTAATGCGATTCATCGCTGGAGAAGAAGCATCAGAACCAAACCAAGAAGATAACACACCAATAGCTTCAACTACAGAAACAGACGCCGACAGAGAGAGGAAACTGGACGAAGAACTCATAAAGGAATTCAGAACAAAAAGCTCAAATAACGATTCAATATCTTACAACGAGAAAGTCTCGAACAACGGCGAGGAGACAGTAGCAGGCATACGAACAATGGATGATACTCACGACCTGTACATCGTGGGGAGAGGAGAATCTCACATATCGCCTCTCACCGCGGGACTCACAGACTGGAGCGAATGTCCAGAGCTTGGAGCAATCGGCGATTTGTTAGCTTCGTCGGATTTTGCAGCGACGACTTCAGTTTTGGTAGTGCAACAGTTCGGAGCAGCAATGGTGGGGGATCATGGAGACGAAGAAGATCCAAACGAGCCCTTCCAAAGCTTGAGATCCACGAATTTGCGGCCACATCCTCCATCAGAACCTCAAAATATGTACAGTACATGA 2397 44.89 MGEVISKREEDMDEQASIANSTDDTIVCYAPSMITTNGVWQGDNPLDYSLPLFILQLTMVVVMTRTLGGVILGPSVLGRSTDFANTVFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVIRRTGSKAMAIAVAGMILPFSIGAAFSFQLHKTDEELNITYIMFLGIALSVTAFPVLARILAELKLINSEIGRMAMASALFNDMCAWVLLAIAIALSENDTSSMASLWVILSSTGFVLFCIFIVRPLISWMIRKTPEGESISEFYICLILTGVMISGFVTDALGTHSVFGAFVFGLVIPNGSLGVALIEKLEDFVSGLLLPLFFAISGLKTNVNRIEGSTSWVAILSITLLAFAGKIIGTLLASICYQMSYREGVLDDKTFTVMVIVALFMTGIITPVVTIIYRPTRRFLPYKKRTIQASKPDSEFRVLVCIHTPRNVPTIINLLDASNPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHVECISVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEATNPAFRLVNQNVLANAPCSVGILVDRGLNGSNRVASNKECHYNITMLFFGGQDDREALSYAWRMSEHPRVSLTVMRFIAGEEASEPNQEDNTPIASTTETDADRERKLDEELIKEFRTKSSNNDSISYNEKVSNNGEETVAGIRTMDDTHDLYIVGRGESHISPLTAGLTDWSECPELGAIGDLLASSDFAATTSVLVVQQFGAAMVGDHGDEEDPNEPFQSLRSTNLRPHPPSEPQNMYST 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1768499 1772868 - Cp4.1LG16g00960.1 Cpe16g00093 482468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00093 798 PANTHER CATION/H + ANTIPORTER 23 374 - -
Cpe16g00093 798 PANTHER CATION/H + ANTIPORTER 374 767 - -
Cpe16g00093 798 MobiDBLite consensus disorder prediction 638 661 - -
Cpe16g00093 798 MobiDBLite consensus disorder prediction 776 798 - -
Cpe16g00093 798 MobiDBLite consensus disorder prediction 764 798 - -
Cpe16g00093 798 Pfam Sodium/hydrogen exchanger family 66 373 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe16g00093 798 Gene3D - 50 407 IPR038770 -
Cpe16g00093 798 Coils Coil 797 798 - -
Cpe16g00093 798 PANTHER BNAA09G08340D PROTEIN 23 374 - -
Cpe16g00093 798 PANTHER BNAA09G08340D PROTEIN 374 767 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01207 Cpe-Chr2:10952668 Cpe16g00093 Cpe-Chr16:1768499 2.59E-132 dispersed
Cpe05g01060 Cpe-Chr5:7011636 Cpe16g00093 Cpe-Chr16:1768499 0 dispersed
Cpe16g00093 Cpe-Chr16:1768499 Cpe19g00015 Cpe-Chr19:121301 0 dispersed
Cpe17g00698 Cpe-Chr17:5553126 Cpe16g00093 Cpe-Chr16:1768499 1.52E-77 dispersed
Cpe20g00900 Cpe-Chr20:7988664 Cpe16g00093 Cpe-Chr16:1768499 1.41E-130 dispersed
Cpe16g00093 Cpe-Chr16:1768499 Cpe14g00481 Cpe-Chr14:3033071 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00093 - - csv:101219265 1334.7