Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00099 AGCCCTCCCTCCCTCCCATTACCAGTCGCTGCACCCCCACCCCGGACGCCGTCTCAGCGGCTGCCGCCGCACGCTGCAATCCCTCTCCCATTCTCTAGCCTCTCCCAGCAATCGGAAAACGCGGTGGTTCAGCCCCTAATCCGCGCCATTCGTAGGATCCTGCCGCTGCCGCTGCCGCTCATTTTCGGATCCCCTAGGTTATCTTGTGCTACCATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACAAATGCTTATTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTGCCTTTGAATCTGAATTAGGTGGTGTCATTCCGGTCGTTAAAACATCCATCGATGGCACGCGCATTATTGGTCGTCTATGTGCTGAACTTCAGCACTTGAGAAACAGCCTACCTGACCAAGTTGTTGTCCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTTCTTGTAATGATCACGTTGCTCTGACACATACTGATCTCGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACGGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAGCTTCACAAATAGGGGTGGCTTGGTTCATCCACATACGTCCATTGAAGATTTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACAGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACGACTGCGACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGCTCCATTGTTGATGAAATGAGGAAGTCGCTAATAGACAGTTACGTGTGA 906 50.11 SPPSLPLPVAAPPPRTPSQRLPPHAAIPLPFSSLSQQSENAVVQPLIRAIRRILPLPLPLIFGSPRLSCATMATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1825615 1829485 - Cp4.1LG16g01010.1 Cpe16g00099 482474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00099 301 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 72 301 IPR002769 GO:0042256|GO:0043022
Cpe16g00099 301 SUPERFAMILY Pentein 72 280 - -
Cpe16g00099 301 SMART eIF6neu2 74 260 IPR002769 GO:0042256|GO:0043022
Cpe16g00099 301 Hamap Translation initiation factor 6 [eif6]. 61 301 IPR002769 GO:0042256|GO:0043022
Cpe16g00099 301 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 72 301 - -
Cpe16g00099 301 Gene3D - 72 281 - -
Cpe16g00099 301 MobiDBLite consensus disorder prediction 1 22 - -
Cpe16g00099 301 CDD IF6 73 279 IPR002769 GO:0042256|GO:0043022
Cpe16g00099 301 Pfam eIF-6 family 75 259 IPR002769 GO:0042256|GO:0043022
Cpe16g00099 301 TIGRFAM eIF-6: putative translation initiation factor eIF-6 75 280 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00099 Cpe-Chr16:1825615 Cpe05g01040 Cpe-Chr5:6863881 2.93E-36 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00099 K03264 - dcr:108209985 417.157