Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00131 ATGGAGTGGGTTCGAGGCCACCAACTGGGTCGCGGAAGTTTTGCCACAATCTATTTAGCCAAGTTTACAAATGGGTCCGATCAGCATCTGCCATTAATGGCGGTCAAATCCTCTGTTTCTGAATCCTCTGTTTCGCTCAAGAACGAGAAGCAAATTCTGGATCGAATTGGGAGTTGCCCGCAAATCATCACTTGTTTTGGGGATGGATTTAGTGTTAAAAAAGATGGGGACAAGTATTATAATCTGTTATTGGAGTATGCCAATGGCGGAAGCCTTGCGGATGCTCTGAAAATCCACGCCGGTGGGTTGCCGGAATTCGATGTTCGAAGGTATACGAGGGGGATTCTTTGTGGGCTTCGGTATATTCATTGCAATGGGTTTGTTCATTGCGATTTGAAGCTTTCCAATGTGTTAATTTTTGGGAATGGTGATGTTAAGATCGCTGATTTTGGGCTTGCTAAACCCGCGGGAAAAATGAAGGCGGCGGAAACAGAGGAGAGGTTTCAGTGGAGAGGGACTCCGATGTATATGTCACCGGAGAATGTCAACGGCGGTGAGTATGAGCCGCCGTGTGATGTTTGGGCATTAGGTTGCGCCGTCGTGGAGATGGTGGCAGGAAAGCCGGCGTGGAGAGTTGGGCCGGAAACGGATATATTCGCGCTGATGATGAGAATCGGAGTCGGAGACGAAGTACCGGAGGTTCCGGAGAATCTATCAGCGGAGGGGAAAGATTTTCTCCGGCGATGTTTTGTCAAGGATCCGAGAAATCGGTGGACGGCGGAGATGCTTTTGAATCACCCATTTGTCGCTGGTGGCGGCAGTACTGTTACATTGAAGGAAGCGGAACTGGCGACGGAGTCGCCGACGGGTCCTTTCGACTTCCCGGAATTCGTTTGCTCCGAACAAGGTCCGGAAGAGTTGAGTTTGTGTTGGGGTAATTCGTCGCCGGAGAAGATGAGGAGGAGGGTGGGGGAATTGGTAACCGAGAAGCCATTGCATTGGTCTGTGATGGATAGTTGGGTGACAGTGAGGTGA 1035 50.24 MEWVRGHQLGRGSFATIYLAKFTNGSDQHLPLMAVKSSVSESSVSLKNEKQILDRIGSCPQIITCFGDGFSVKKDGDKYYNLLLEYANGGSLADALKIHAGGLPEFDVRRYTRGILCGLRYIHCNGFVHCDLKLSNVLIFGNGDVKIADFGLAKPAGKMKAAETEERFQWRGTPMYMSPENVNGGEYEPPCDVWALGCAVVEMVAGKPAWRVGPETDIFALMMRIGVGDEVPEVPENLSAEGKDFLRRCFVKDPRNRWTAEMLLNHPFVAGGGSTVTLKEAELATESPTGPFDFPEFVCSEQGPEELSLCWGNSSPEKMRRRVGELVTEKPLHWSVMDSWVTVR 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2986556 2987590 - Cp4.1LG16g01290.1 Cpe16g00131 482506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00131 344 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Cpe16g00131 344 Pfam Protein kinase domain 5 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00131 344 SMART serkin_6 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00131 344 SUPERFAMILY Protein kinase-like (PK-like) 3 284 IPR011009 -
Cpe16g00131 344 ProSiteProfiles Protein kinase domain profile. 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00131 344 CDD STKc_MAPKKK 2 269 - -
Cpe16g00131 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Cpe16g00131 344 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 315 - -
Cpe16g00131 344 Gene3D Transferase(Phosphotransferase) domain 1 2 291 - -
Cpe16g00131 344 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01164 Cpe-Chr5:7934777 Cpe16g00131 Cpe-Chr16:2986556 0 dispersed
Cpe12g01070 Cpe-Chr12:8920469 Cpe16g00131 Cpe-Chr16:2986556 1.60E-25 dispersed
Cpe16g00131 Cpe-Chr16:2986556 Cpe19g00624 Cpe-Chr19:5093380 3.94E-138 dispersed
Cpe16g00131 Cpe-Chr16:2986556 Cpe05g01434 Cpe-Chr5:10022802 5.60E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62883 PF00069 Pkinase 5.30E-54 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00131 - - csv:101214756 567.385