Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00136 ATGGGGGTATCATTACTCAAAGTACTCCTCAGACATATTTCATCATTTCTTCAACTTTCATCTACTGACTTCATAAATTTACAACCTACTCTGAAGTACTTCCACAAAATAGAAGGGATCTTCAAACTATTGAGACCAATACTAGATGCAGTTGTTGATTCAGATATAGCTTCCGATGAAGAGCTTACTAAGGCGTTTGAAGAACTCGATCATTCAATTGATGAACTAAGGGCGCTCTTCGAAAATTGGCAACCGTTGTCGAGTAAAGTATACTTTGTATTGCAAAGTGAAGCATTGATATCAAAGATTGGGAAATCTTGCTTAGATATATTCCAGCTTTTTCAGTCTTCAAATGAAAATCTTCCGGAGGAATTGAGTTCATCATCTCTTGAGCACTGCGTCCAAAAAATTAAGCATTTTGGAAAGGAAGAAATATCTTCCGTTATTAAAGATGCCATAGGGAATGAAGTAGAGGGCATTGCACCCAGCTCAGATGTTTTGGTGAAACTTGCGGATTTTCTGAGCTTGAGATCAAATCAGGAGATCTTAATTGAGGCTGTAGCACTTGAAAAGTTGAAAGAGAGTGCAGAACAAGCTGAAAATACTGAAGAAGCTGAGGGCATTGATCAAATGATTGCTCTTGTAACCCATATGCATGAACGGTTTATTATGATAAATCAATCCCAAAATTCTAGTCCTGTATCAATACCTGCTGATTTCTGCTGTCCTCTTTCTCTCGAACTGATGACAGATCCAGTTATTGTAGCATCGGGGCAGACGTACGAGAGGGTATTTATTAAAAATTGGATCGATCTGGGGCTCAATGTTTGCCCGAAGACTAGACAGACGTTGGTTCACACGAATCTTATACCAAATTACACTGTTAAGGCTCTGATTGCAAACTGGTGTGAGACAAACAATGTAAAATTGTCTGATCCCTCGAGGTCGGTGAACTTAAACCAGCTTTCGCCTGTTCTCGCTGGGAACTTTGAGTCTGATACCCATCGAGAGCCCATTTTTCCTCATTCCCCTGGTTACCAACCGATGTCCCCGCAGTCAACCAGGTCTGCAGGTTCAGGAAAGAACATGAACTCGCTTGGGGTAAGCTATCGAGATGGAAGTTCTTCTTTGCTCTCCCACTCTTTCTCTGAGGATTCCTTATCAAATGATGCTGGTGATGAACGTGAGATTGATGTTAGTAGACTGTTGCTATCAAGCTCGGAAGATCAAATGGCCAAATTGGAAGAAAATGGTTACGATTTGGTCGCTAAACCGTCTACGTCACCATCTAAAGCCAATGTTCCAGATACCAGTGGTGAGGATGAACCGTCTCATAGTCATAACAGGACCGCCTCCACCTCTAGTGCAGTCTCGAATACTAATCTCTCTCAAGGAACTTCAGGGGAACCCAATGAATCTGTCAGTGATGCTGCTGGGGAGAGTAAATCAGAGCCCTTGGCTGCTACCTCGACTACCAACCACAGAGAACCAGATCGGGAGCATCCACCGAGACTAGCTGACCCAAGATCTCAAGGTAATACAATGTGGCTCCGACCATCAGAGAGGTTTGCTTCTAAGATGATTGCACCATCTGCTAATGAGACGAGGCCTGATCTTTCTGCTATTGAAGCACAAGTTCAGAAAGTGGTAGAGGAATTAAAGAGCAGTTCACTTGAAACTTTAAGAGGAGCTACGGCTGAACTGCGGCTACTGGCCAGACATAACATGGATAATCGAATAGTGATCGCTCAATCCGGGGCCATCGAATATTTGGTTGATTTGCTCCTGTCTGCAGACTCGAAGCTACAGGAGAATGCTGTGACAGCTCTTCTAAACTTATCGATCAATGATAATAACAAAAATGTCATTGCCCAGGCTAATGCAATTGAACCATTGATTCATGTTCTTAAAACTGGGAGCCCAGAAGCAAAGGAGAACTCAGCAGCAACTCTTTTTAGCCTCTCAGTGATTGAAGAGAACAAGGTCAAAATTGGAAGGTCTGGAGCAATAGGACCTCTAGTTGAATTACTGGGTAATGGAACTCCCAGGGGAAAGAAGGATGCAGCTACAGCTTTGTTTAATTTGTCGATATTCCACGAGAACAAGGCTAGAATCGTACAAGCTGGAGCTGTGAGGCATCTTGTGGAGCTGATGGACCCAGCTGCAGGAATGGTTGACAAGGCTGTTGCTGTGTTGGCAAATCTCACCACGATTCCCGAGGGTCGGTCTGCAATTGGTCAGGAAGGTGGAATTCCTGTTCTTGTCGAGGTCGTCGAGTTGGGTTCTGGGAGAGGAAAGGAAAATGCAGCAGCAGCATTATTGCAGCTTTGCACAACAAGCAGTAGGCATTGCAGTATGGTGCTCCAAGAAGGAGCCGTGCCACCATTAGTGGCATTGTCTCAATCTGGCACTGCTAGAGCCAAAGAAAAGGCTCAAGCGCTTCTTAGCCATTTCAGAAGCCAGAGACATGGGAATTCGGGAAGAGGGTAA 2490 44.02 MGVSLLKVLLRHISSFLQLSSTDFINLQPTLKYFHKIEGIFKLLRPILDAVVDSDIASDEELTKAFEELDHSIDELRALFENWQPLSSKVYFVLQSEALISKIGKSCLDIFQLFQSSNENLPEELSSSSLEHCVQKIKHFGKEEISSVIKDAIGNEVEGIAPSSDVLVKLADFLSLRSNQEILIEAVALEKLKESAEQAENTEEAEGIDQMIALVTHMHERFIMINQSQNSSPVSIPADFCCPLSLELMTDPVIVASGQTYERVFIKNWIDLGLNVCPKTRQTLVHTNLIPNYTVKALIANWCETNNVKLSDPSRSVNLNQLSPVLAGNFESDTHREPIFPHSPGYQPMSPQSTRSAGSGKNMNSLGVSYRDGSSSLLSHSFSEDSLSNDAGDEREIDVSRLLLSSSEDQMAKLEENGYDLVAKPSTSPSKANVPDTSGEDEPSHSHNRTASTSSAVSNTNLSQGTSGEPNESVSDAAGESKSEPLAATSTTNHREPDREHPPRLADPRSQGNTMWLRPSERFASKMIAPSANETRPDLSAIEAQVQKVVEELKSSSLETLRGATAELRLLARHNMDNRIVIAQSGAIEYLVDLLLSADSKLQENAVTALLNLSINDNNKNVIAQANAIEPLIHVLKTGSPEAKENSAATLFSLSVIEENKVKIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSIFHENKARIVQAGAVRHLVELMDPAAGMVDKAVAVLANLTTIPEGRSAIGQEGGIPVLVEVVELGSGRGKENAAAALLQLCTTSSRHCSMVLQEGAVPPLVALSQSGTARAKEKAQALLSHFRSQRHGNSGRG 829
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3117721 3121230 - Cp4.1LG16g01370.1 Cpe16g00136 482511

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00136 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 709 750 IPR000225 GO:0005515
Cpe16g00136 829 MobiDBLite consensus disorder prediction 448 492 - -
Cpe16g00136 829 MobiDBLite consensus disorder prediction 423 437 - -
Cpe16g00136 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 668 710 IPR000225 GO:0005515
Cpe16g00136 829 Pfam Armadillo/beta-catenin-like repeat 616 655 IPR000225 GO:0005515
Cpe16g00136 829 Pfam Armadillo/beta-catenin-like repeat 577 614 IPR000225 GO:0005515
Cpe16g00136 829 Pfam Armadillo/beta-catenin-like repeat 659 696 IPR000225 GO:0005515
Cpe16g00136 829 MobiDBLite consensus disorder prediction 333 368 - -
Cpe16g00136 829 Gene3D - 526 825 IPR011989 -
Cpe16g00136 829 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 8 825 - -
Cpe16g00136 829 MobiDBLite consensus disorder prediction 374 393 - -
Cpe16g00136 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 586 628 IPR000225 GO:0005515
Cpe16g00136 829 SUPERFAMILY ARM repeat 546 818 IPR016024 -
Cpe16g00136 829 Coils Coil 179 209 - -
Cpe16g00136 829 SMART arm_5 657 697 IPR000225 GO:0005515
Cpe16g00136 829 SMART arm_5 616 656 IPR000225 GO:0005515
Cpe16g00136 829 SMART arm_5 698 737 IPR000225 GO:0005515
Cpe16g00136 829 SMART arm_5 738 778 IPR000225 GO:0005515
Cpe16g00136 829 SMART arm_5 575 615 IPR000225 GO:0005515
Cpe16g00136 829 SMART arm_5 780 820 IPR000225 GO:0005515
Cpe16g00136 829 Pfam U-box domain 236 306 IPR003613 GO:0004842|GO:0016567
Cpe16g00136 829 ProSiteProfiles U-box domain profile. 235 309 IPR003613 GO:0004842|GO:0016567
Cpe16g00136 829 MobiDBLite consensus disorder prediction 418 514 - -
Cpe16g00136 829 PANTHER U BOX DOMAIN-CONTAINING 8 825 - -
Cpe16g00136 829 Coils Coil 397 417 - -
Cpe16g00136 829 SUPERFAMILY RING/U-box 224 312 - -
Cpe16g00136 829 CDD RING-Ubox_PUB 240 282 IPR045210 -
Cpe16g00136 829 MobiDBLite consensus disorder prediction 346 368 - -
Cpe16g00136 829 SMART Ubox_2 239 302 IPR003613 GO:0004842|GO:0016567
Cpe16g00136 829 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 310 IPR013083 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00136 - - - cmax:111483613 1512.66
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe05g01172 Cpe16g00136 CCT
Cpe16g00136 Cpe19g00648 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g01147 Cpe-Chr12:9426757 Cpe16g00136 Cpe-Chr16:3117721 1.43E-63 dispersed
Cpe15g00149 Cpe-Chr15:1235181 Cpe16g00136 Cpe-Chr16:3117721 6.37E-10 dispersed
Cpe16g00136 Cpe-Chr16:3117721 Cpe17g00897 Cpe-Chr17:6964531 1.15E-62 dispersed
Cpe20g00631 Cpe-Chr20:3948834 Cpe16g00136 Cpe-Chr16:3117721 7.02E-08 dispersed
Cpe16g00136 Cpe-Chr16:3117721 Cpe19g00648 Cpe-Chr19:5228574 1.30E-137 wgd
Cpe16g00136 Cpe-Chr16:3117721 Cpe05g01172 Cpe-Chr5:8001943 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi7g972 Blo04g01074 . Bda04g00003 . Bpe06g00004 Bpe15g00315 Bma09g00003 . . Cmo07g00686 Cma02g00507 Cma20g00982 Car02g00348 Car20g00844 . Cpe19g00648 Cpe16g00136 Bhi03g00986 Tan03g1617 . . . . . Cla01g01681 Cam01g1770 Cec04g1418 Cco04g1481 Clacu01g1794 Cmu01g1675 Cre04g1348 Cone6ag1431 . Cone8ag0150 Cone12ag0156 Lsi01g00933 Csa06g02989 . Cme08g00615 . . . . . . Bma03g01129 . . Cmo02g00518 Cmo20g00999 . Cma07g00675 . . . Cpe05g01172 . . . . . . . . . . . . . . . . Chy02g00870 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cpe03g00494 CCT 1 1040 U-box Gene Family AT5G15400 76.4 0.0e+00 1582.8
Cpe04g00173 CCT 1 1041 U-box Gene Family AT5G15400 75.1 0.0e+00 1541.6
Cpe05g01172 CCT 5 775 U-box Gene Family AT5G67340 50.2 8.6e-126 448.4
Cpe17g00897 . 1 757 U-box Gene Family AT3G54790 51.9 3.9e-132 469.5
Cpe05g01172 CCT 201 774 U-box Gene Family AT2G23140 63.3 2.2e-112 403.7
Cpe16g00136 CCT,CST 196 829 U-box Gene Family AT2G23140 63.3 1.4e-111 401.0
Cpe11g00066 . 1 772 U-box Gene Family AT1G24330 59.3 4.7e-242 834.7
Cpe07g00054 . 1 805 U-box Gene Family AT1G24330 55.5 1.0e-233 807.0
Cpe01g01608 CST 1 761 U-box Gene Family AT1G24330 57.1 3.2e-227 785.4
Cpe09g00579 CST 1 383 U-box Gene Family AT1G24330 69.8 2.8e-146 516.5
Cpe11g00066 . 1 771 U-box Gene Family AT1G67530 59.8 4.1e-238 821.6
Cpe07g00054 . 1 713 U-box Gene Family AT1G67530 61.3 1.8e-233 806.2
Cpe01g01608 CST 1 761 U-box Gene Family AT1G67530 56.6 1.4e-222 770.0
Cpe09g00579 CST 1 383 U-box Gene Family AT1G67530 68.0 9.8e-139 491.5
Cpe19g00982 . 1 362 U-box Gene Family AT4G21350 63.1 3.1e-122 435.6
Cpe10g00809 . 1 362 U-box Gene Family AT4G21350 63.0 6.4e-120 427.9
Cpe15g00150 . 149 473 U-box Gene Family AT3G07360 57.0 1.0e-81 300.8
Cpe05g00133 . 134 455 U-box Gene Family AT3G07360 55.7 2.5e-80 296.2
Cpe01g00910 . 249 450 U-box Gene Family AT1G71020 66.0 1.9e-71 267.3
Cpe01g00039 . 262 457 U-box Gene Family AT1G71020 60.2 2.7e-62 236.9
Cpe13g00377 . 119 322 U-box Gene Family AT1G71020 55.8 2.1e-54 210.7
Cpe09g00408 CCT 214 417 U-box Gene Family AT1G71020 53.1 2.6e-49 193.7
Cpe02g01239 . 258 427 U-box Gene Family AT1G71020 58.4 6.4e-48 189.1
Cpe16g00603 . 256 426 U-box Gene Family AT1G71020 57.1 1.2e-46 184.9
Cpe01g01250 CCT 249 408 U-box Gene Family AT1G71020 56.4 9.6e-44 175.3
Cpe01g00910 . 6 650 U-box Gene Family AT1G23030 56.4 4.5e-107 386.0
Cpe01g00039 . 16 661 U-box Gene Family AT1G23030 52.3 6.4e-93 339.0
Cpe02g01239 . 93 638 U-box Gene Family AT2G28830 59.6 3.8e-103 372.9
Cpe16g00603 . 93 636 U-box Gene Family AT2G28830 50.4 1.3e-98 357.8
Cpe20g00814 . 92 570 U-box Gene Family AT2G28830 52.9 2.0e-75 280.8
Cpe02g01239 . 1 662 U-box Gene Family AT3G46510 68.8 7.0e-170 594.7
Cpe16g00603 . 3 639 U-box Gene Family AT3G46510 65.9 2.6e-161 566.2
Cpe20g00814 . 1 572 U-box Gene Family AT3G46510 60.8 8.6e-128 454.9
Cpe09g00408 CCT 9 624 U-box Gene Family AT3G46510 58.2 1.7e-123 440.7
Cpe01g01250 CCT 16 618 U-box Gene Family AT3G46510 55.9 2.3e-112 403.7
Cpe09g00408 CCT 1 626 U-box Gene Family AT3G54850 67.0 7.1e-164 574.7
Cpe01g01250 CCT 12 621 U-box Gene Family AT3G54850 64.5 8.5e-149 524.6
Cpe16g00603 . 13 629 U-box Gene Family AT3G54850 56.4 1.5e-113 407.5
Cpe02g01239 . 8 641 U-box Gene Family AT3G54850 55.0 1.4e-103 374.4
Cpe16g00348 . 97 650 U-box Gene Family AT5G42340 66.2 3.7e-123 439.5
Cpe10g00996 CCT 9 669 U-box Gene Family AT5G01830 57.1 2.1e-198 689.5
Cpe19g00149 CCT 1 609 U-box Gene Family AT5G01830 54.4 3.4e-172 602.4
Cpe09g00791 CCT 3 708 U-box Gene Family AT1G29340 67.9 2.1e-244 842.4
Cpe20g00479 CCT 1 710 U-box Gene Family AT1G29340 67.5 1.4e-243 839.7
Cpe02g01449 . 28 443 U-box Gene Family AT5G37490 50.1 4.5e-109 392.1
Cpe08g00965 . 2 407 U-box Gene Family AT3G52450 54.0 4.5e-125 445.3
Cpe10g01029 . 4 422 U-box Gene Family AT3G52450 53.3 3.9e-121 432.2
Cpe19g00185 . 2 380 U-box Gene Family AT3G52450 51.0 6.1e-106 381.7
Cpe08g00965 . 2 406 U-box Gene Family AT2G35930 55.7 7.2e-125 444.5
Cpe10g01029 . 4 422 U-box Gene Family AT2G35930 52.0 7.8e-119 424.5
Cpe16g00824 . 10 409 U-box Gene Family AT2G35930 50.4 4.7e-116 415.2
Cpe19g00185 . 2 380 U-box Gene Family AT2G35930 54.0 6.2e-108 388.3
Cpe01g00435 . 7 420 U-box Gene Family AT3G19380 64.8 3.7e-148 521.9
Cpe01g00435 . 1 420 U-box Gene Family AT1G49780 65.3 2.2e-153 539.3
Cpe19g00539 CCT,CST 1 411 U-box Gene Family AT5G64660 54.3 5.9e-122 434.9
Cpe10g00346 CCT,CST 1 389 U-box Gene Family AT5G64660 51.0 4.1e-107 385.6
Cpe19g00539 CCT,CST 1 411 U-box Gene Family AT5G09800 51.8 8.9e-107 384.4
Cpe02g00230 CCT,CST 1 455 U-box Gene Family AT3G49810 62.3 6.2e-154 541.2
Cpe11g00111 CCT,CST 23 441 U-box Gene Family AT3G49810 64.0 3.0e-148 522.3
Cpe07g00525 CCT,CST 1 417 U-box Gene Family AT3G49810 59.5 1.0e-132 470.7
Cpe06g00211 CCT,CST 1 299 U-box Gene Family AT3G49810 63.3 3.3e-107 386.0
Cpe11g00111 CCT,CST 19 441 U-box Gene Family AT5G65920 65.3 1.8e-150 529.6
Cpe02g00230 CCT,CST 1 455 U-box Gene Family AT5G65920 61.8 1.2e-149 526.9
Cpe07g00525 CCT,CST 1 417 U-box Gene Family AT5G65920 59.7 2.4e-129 459.5
Cpe06g00211 CCT,CST 1 299 U-box Gene Family AT5G65920 62.6 4.0e-105 379.0
Cpe08g00548 . 3 869 U-box Gene Family AT2G45910 50.9 1.9e-225 779.6
Cpe11g01178 . 7 722 U-box Gene Family AT2G19410 50.3 7.7e-208 721.1
Cpe13g00095 CCT,CST,ECH 48 829 U-box Gene Family AT4G25160 52.2 3.8e-221 765.4
Cpe04g01536 . 1 500 U-box Gene Family AT5G65200 51.5 5.6e-96 349.0
Cpe13g00921 CCT 58 552 U-box Gene Family AT5G40140 57.6 3.2e-96 349.7
Cpe01g02363 CCT 57 545 U-box Gene Family AT5G40140 55.4 1.4e-86 317.8
Cpe18g00826 . 27 480 U-box Gene Family AT5G40140 51.0 6.6e-57 219.2
Cpe20g00225 . 29 490 U-box Gene Family AT5G40140 53.2 2.5e-56 217.2
Cpe09g01045 . 29 488 U-box Gene Family AT5G40140 50.1 1.4e-54 211.5
Cpe18g00826 . 26 480 U-box Gene Family AT5G62560 50.2 1.0e-73 275.0
Cpe11g00782 . 4 814 U-box Gene Family AT1G76390 60.1 1.2e-264 909.8
Cpe11g00782 . 13 812 U-box Gene Family AT1G20780 61.7 2.7e-277 951.8
Cpe11g00066 . 1 773 U-box Gene Family AT1G27910 62.2 1.6e-266 916.0
Cpe01g01608 CST 1 770 U-box Gene Family AT1G27910 61.7 6.0e-258 887.5
Cpe07g00054 . 1 813 U-box Gene Family AT1G27910 59.6 7.9e-258 887.1
Cpe09g00579 CST 1 384 U-box Gene Family AT1G27910 67.4 2.1e-141 500.4
Cpe19g00671 CCT 1 593 U-box Gene Family AT5G67530 74.8 8.8e-265 909.8
Cpe10g00480 CCT 1 543 U-box Gene Family AT5G67530 67.3 4.6e-221 764.6
Cpe03g01691 . 3 151 U-box Gene Family AT5G67530 52.3 3.8e-42 170.2
Cpe03g00282 CCT,ECH 202 352 U-box Gene Family AT5G67530 50.3 6.5e-42 169.5
Cpe19g00732 . 4 792 U-box Gene Family AT5G65500 50.9 1.5e-211 733.4
Cpe05g00741 . 197 649 U-box Gene Family AT5G51270 58.1 1.8e-148 523.9
Cpe08g00356 CST 1 516 U-box Gene Family AT1G04510 75.1 5.1e-224 774.2
Cpe03g01541 CST 1 524 U-box Gene Family AT1G04510 73.6 6.6e-224 773.9
Cpe08g00356 CST 1 485 U-box Gene Family AT2G33340 73.9 1.9e-209 725.7
Cpe03g01541 CST 1 491 U-box Gene Family AT2G33340 72.2 6.8e-207 717.2
Cpe05g00132 . 11 280 U-box Gene Family AT3G07370 65.2 5.5e-100 361.3
Cpe15g00149 . 10 278 U-box Gene Family AT3G07370 65.1 6.0e-99 357.8
Cpe03g00494 CCT 1 1040 U-box Gene Family AT5G15400 76.4 0.0e+00 1582.8
Cpe04g00173 CCT 1 1041 U-box Gene Family AT5G15400 75.1 0.0e+00 1541.6
Cpe05g01172 CCT 5 775 U-box Gene Family AT5G67340 50.2 8.6e-126 448.4
Cpe17g00897 . 1 757 U-box Gene Family AT3G54790 51.9 3.9e-132 469.5
Cpe05g01172 CCT 201 774 U-box Gene Family AT2G23140 63.3 2.2e-112 403.7
Cpe16g00136 CCT,CST 196 829 U-box Gene Family AT2G23140 63.3 1.4e-111 401.0
Cpe11g00066 . 1 772 U-box Gene Family AT1G24330 59.3 4.7e-242 834.7
Cpe07g00054 . 1 805 U-box Gene Family AT1G24330 55.5 1.0e-233 807.0
Cpe01g01608 CST 1 761 U-box Gene Family AT1G24330 57.1 3.2e-227 785.4
Cpe09g00579 CST 1 383 U-box Gene Family AT1G24330 69.8 2.8e-146 516.5
Cpe11g00066 . 1 771 U-box Gene Family AT1G67530 59.8 4.1e-238 821.6
Cpe07g00054 . 1 713 U-box Gene Family AT1G67530 61.3 1.8e-233 806.2
Cpe01g01608 CST 1 761 U-box Gene Family AT1G67530 56.6 1.4e-222 770.0
Cpe09g00579 CST 1 383 U-box Gene Family AT1G67530 68.0 9.8e-139 491.5
Cpe19g00982 . 1 362 U-box Gene Family AT4G21350 63.1 3.1e-122 435.6
Cpe10g00809 . 1 362 U-box Gene Family AT4G21350 63.0 6.4e-120 427.9
Cpe15g00150 . 149 473 U-box Gene Family AT3G07360 57.0 1.0e-81 300.8
Cpe05g00133 . 134 455 U-box Gene Family AT3G07360 55.7 2.5e-80 296.2
Cpe01g00910 . 249 450 U-box Gene Family AT1G71020 66.0 1.9e-71 267.3
Cpe01g00039 . 262 457 U-box Gene Family AT1G71020 60.2 2.7e-62 236.9
Cpe13g00377 . 119 322 U-box Gene Family AT1G71020 55.8 2.1e-54 210.7
Cpe09g00408 CCT 214 417 U-box Gene Family AT1G71020 53.1 2.6e-49 193.7
Cpe02g01239 . 258 427 U-box Gene Family AT1G71020 58.4 6.4e-48 189.1
Cpe16g00603 . 256 426 U-box Gene Family AT1G71020 57.1 1.2e-46 184.9
Cpe01g01250 CCT 249 408 U-box Gene Family AT1G71020 56.4 9.6e-44 175.3
Cpe01g00910 . 6 650 U-box Gene Family AT1G23030 56.4 4.5e-107 386.0
Cpe01g00039 . 16 661 U-box Gene Family AT1G23030 52.3 6.4e-93 339.0
Cpe02g01239 . 93 638 U-box Gene Family AT2G28830 59.6 3.8e-103 372.9
Cpe16g00603 . 93 636 U-box Gene Family AT2G28830 50.4 1.3e-98 357.8
Cpe20g00814 . 92 570 U-box Gene Family AT2G28830 52.9 2.0e-75 280.8
Cpe02g01239 . 1 662 U-box Gene Family AT3G46510 68.8 7.0e-170 594.7
Cpe16g00603 . 3 639 U-box Gene Family AT3G46510 65.9 2.6e-161 566.2
Cpe20g00814 . 1 572 U-box Gene Family AT3G46510 60.8 8.6e-128 454.9
Cpe09g00408 CCT 9 624 U-box Gene Family AT3G46510 58.2 1.7e-123 440.7
Cpe01g01250 CCT 16 618 U-box Gene Family AT3G46510 55.9 2.3e-112 403.7
Cpe09g00408 CCT 1 626 U-box Gene Family AT3G54850 67.0 7.1e-164 574.7
Cpe01g01250 CCT 12 621 U-box Gene Family AT3G54850 64.5 8.5e-149 524.6
Cpe16g00603 . 13 629 U-box Gene Family AT3G54850 56.4 1.5e-113 407.5
Cpe02g01239 . 8 641 U-box Gene Family AT3G54850 55.0 1.4e-103 374.4
Cpe16g00348 . 97 650 U-box Gene Family AT5G42340 66.2 3.7e-123 439.5
Cpe10g00996 CCT 9 669 U-box Gene Family AT5G01830 57.1 2.1e-198 689.5
Cpe19g00149 CCT 1 609 U-box Gene Family AT5G01830 54.4 3.4e-172 602.4
Cpe09g00791 CCT 3 708 U-box Gene Family AT1G29340 67.9 2.1e-244 842.4
Cpe20g00479 CCT 1 710 U-box Gene Family AT1G29340 67.5 1.4e-243 839.7
Cpe02g01449 . 28 443 U-box Gene Family AT5G37490 50.1 4.5e-109 392.1
Cpe08g00965 . 2 407 U-box Gene Family AT3G52450 54.0 4.5e-125 445.3
Cpe10g01029 . 4 422 U-box Gene Family AT3G52450 53.3 3.9e-121 432.2
Cpe19g00185 . 2 380 U-box Gene Family AT3G52450 51.0 6.1e-106 381.7
Cpe08g00965 . 2 406 U-box Gene Family AT2G35930 55.7 7.2e-125 444.5
Cpe10g01029 . 4 422 U-box Gene Family AT2G35930 52.0 7.8e-119 424.5
Cpe16g00824 . 10 409 U-box Gene Family AT2G35930 50.4 4.7e-116 415.2
Cpe19g00185 . 2 380 U-box Gene Family AT2G35930 54.0 6.2e-108 388.3
Cpe01g00435 . 7 420 U-box Gene Family AT3G19380 64.8 3.7e-148 521.9
Cpe01g00435 . 1 420 U-box Gene Family AT1G49780 65.3 2.2e-153 539.3
Cpe19g00539 CCT,CST 1 411 U-box Gene Family AT5G64660 54.3 5.9e-122 434.9
Cpe10g00346 CCT,CST 1 389 U-box Gene Family AT5G64660 51.0 4.1e-107 385.6
Cpe19g00539 CCT,CST 1 411 U-box Gene Family AT5G09800 51.8 8.9e-107 384.4
Cpe02g00230 CCT,CST 1 455 U-box Gene Family AT3G49810 62.3 6.2e-154 541.2
Cpe11g00111 CCT,CST 23 441 U-box Gene Family AT3G49810 64.0 3.0e-148 522.3
Cpe07g00525 CCT,CST 1 417 U-box Gene Family AT3G49810 59.5 1.0e-132 470.7
Cpe06g00211 CCT,CST 1 299 U-box Gene Family AT3G49810 63.3 3.3e-107 386.0
Cpe11g00111 CCT,CST 19 441 U-box Gene Family AT5G65920 65.3 1.8e-150 529.6
Cpe02g00230 CCT,CST 1 455 U-box Gene Family AT5G65920 61.8 1.2e-149 526.9
Cpe07g00525 CCT,CST 1 417 U-box Gene Family AT5G65920 59.7 2.4e-129 459.5
Cpe06g00211 CCT,CST 1 299 U-box Gene Family AT5G65920 62.6 4.0e-105 379.0
Cpe08g00548 . 3 869 U-box Gene Family AT2G45910 50.9 1.9e-225 779.6
Cpe11g01178 . 7 722 U-box Gene Family AT2G19410 50.3 7.7e-208 721.1
Cpe13g00095 CCT,CST,ECH 48 829 U-box Gene Family AT4G25160 52.2 3.8e-221 765.4
Cpe04g01536 . 1 500 U-box Gene Family AT5G65200 51.5 5.6e-96 349.0
Cpe13g00921 CCT 58 552 U-box Gene Family AT5G40140 57.6 3.2e-96 349.7
Cpe01g02363 CCT 57 545 U-box Gene Family AT5G40140 55.4 1.4e-86 317.8
Cpe18g00826 . 27 480 U-box Gene Family AT5G40140 51.0 6.6e-57 219.2
Cpe20g00225 . 29 490 U-box Gene Family AT5G40140 53.2 2.5e-56 217.2
Cpe09g01045 . 29 488 U-box Gene Family AT5G40140 50.1 1.4e-54 211.5
Cpe18g00826 . 26 480 U-box Gene Family AT5G62560 50.2 1.0e-73 275.0
Cpe11g00782 . 4 814 U-box Gene Family AT1G76390 60.1 1.2e-264 909.8
Cpe11g00782 . 13 812 U-box Gene Family AT1G20780 61.7 2.7e-277 951.8
Cpe11g00066 . 1 773 U-box Gene Family AT1G27910 62.2 1.6e-266 916.0
Cpe01g01608 CST 1 770 U-box Gene Family AT1G27910 61.7 6.0e-258 887.5
Cpe07g00054 . 1 813 U-box Gene Family AT1G27910 59.6 7.9e-258 887.1
Cpe09g00579 CST 1 384 U-box Gene Family AT1G27910 67.4 2.1e-141 500.4
Cpe19g00671 CCT 1 593 U-box Gene Family AT5G67530 74.8 8.8e-265 909.8
Cpe10g00480 CCT 1 543 U-box Gene Family AT5G67530 67.3 4.6e-221 764.6
Cpe03g01691 . 3 151 U-box Gene Family AT5G67530 52.3 3.8e-42 170.2
Cpe03g00282 CCT,ECH 202 352 U-box Gene Family AT5G67530 50.3 6.5e-42 169.5
Cpe19g00732 . 4 792 U-box Gene Family AT5G65500 50.9 1.5e-211 733.4
Cpe05g00741 . 197 649 U-box Gene Family AT5G51270 58.1 1.8e-148 523.9
Cpe08g00356 CST 1 516 U-box Gene Family AT1G04510 75.1 5.1e-224 774.2
Cpe03g01541 CST 1 524 U-box Gene Family AT1G04510 73.6 6.6e-224 773.9
Cpe08g00356 CST 1 485 U-box Gene Family AT2G33340 73.9 1.9e-209 725.7
Cpe03g01541 CST 1 491 U-box Gene Family AT2G33340 72.2 6.8e-207 717.2
Cpe05g00132 . 11 280 U-box Gene Family AT3G07370 65.2 5.5e-100 361.3
Cpe15g00149 . 10 278 U-box Gene Family AT3G07370 65.1 6.0e-99 357.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004594 2 4 1 2 2 1 2 1 1 1 1 1 2 0 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe16g00136 Cpe_Chr16 FPKM 1.945146 2.187007 0.734884 0.837624 2.22119 2.563282 2.775521 2.445731 2.312133 2.308866