Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00143 ATGCTATCTATCTTTCTAGCCTCGAGCTTTCTTCTTCGACCACCTCGCCAAAACCTTCCACCAACACCATTTTTTTCTCTTCCAATTATTGGTCATCTCCATCTCATCAAACACCCTCTCCATCGAATCCTTCACAACCTCTCCAAAACCTATGGAGACATCTTCTCCCTCCGATTCGGTTCACGGCTCGTTGTAGTTGTATCATCGCCTTCACTCGTACAAGAATGCTTTACAATGAACGATATTGTTCTTGCAAATCGCCCATTGTTGGGCACCGGAAAGCACTTAGCATACAACCATACAACCATGGCCGTCGCCCCTTACGGCGATCACTGGCGAAACCTTCGTCGAATCGGTGCCCTCGAGATTTTCTCTACGAGTCGGCTAAATCTATTTATGGGAATTCGAGAGGATGAAGTTAAATGCTTGATGCTTCGATTACGTGGGAGTTCGTCGGAAGAATTCACTCTAGTCGAGCCCGAGACCATGTTCTTAGATCTTATGTACAATGTTATTATGAGAATGGTGGCGGGGAATAAGCCTTACGAACACGATAAGGGACGATCGAGGGAATTTAGAGAGCTCGTGACAAAGATTATGGCGGTTGGTGGGACAACAAATCCAGGAGACTTCATACCAATATTGAATTGGATTGATCCCACAGTGCTCTCTATCCTCCCTAGTTTTGCCCTGCAGGCTGGTTAG 705 46.1 MLSIFLASSFLLRPPRQNLPPTPFFSLPIIGHLHLIKHPLHRILHNLSKTYGDIFSLRFGSRLVVVVSSPSLVQECFTMNDIVLANRPLLGTGKHLAYNHTTMAVAPYGDHWRNLRRIGALEIFSTSRLNLFMGIREDEVKCLMLRLRGSSSEEFTLVEPETMFLDLMYNVIMRMVAGNKPYEHDKGRSREFRELVTKIMAVGGTTNPGDFIPILNWIDPTVLSILPSFALQAG 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3327000 3330335 + Cp4.1LG16g01450.1 Cpe16g00143 482518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00143 234 PRINTS E-class P450 group I signature 48 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00143 234 PRINTS E-class P450 group I signature 167 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00143 234 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 220 - -
Cpe16g00143 234 Gene3D Cytochrome P450 13 230 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00143 234 SUPERFAMILY Cytochrome P450 20 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe16g00143 234 PANTHER P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 8, PUTATIVE-RELATED 5 220 - -
Cpe16g00143 234 Pfam Cytochrome P450 21 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00143 Cpe-Chr16:3327000 Cpe10g00457 Cpe-Chr10:2670303 7.73E-64 dispersed
Cpe16g00142 Cpe-Chr16:3317960 Cpe16g00143 Cpe-Chr16:3327000 2.51E-79 tandem
Cpe16g00143 Cpe-Chr16:3327000 Cpe16g00144 Cpe-Chr16:3352024 1.94E-54 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00143 K13260 - csv:101204413 342.428