Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00149 ATGATCTGCCATTGGAGCTGCCATTGGAGCTTCAGAGTTCTTGCTTTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCAATCTTCTTGCTATGGACTGAATTTTGATGGGGTTCTCTTGCTTTCGTTCAAGTATGGCGTTTTGGATGACCCTCTTTTTGTTCTTCAGAACTGGAATTACTCCGATGAGACGCCCTGTTCATGGCGGGGAGTTCAATGCTCTGACGGTGGTGGTGCCGGCTCTAGAGTTACAGGTTTGTCTCTACCGAATTCTCAGCTGATGGGCTCTGTTTCTTCTGATCTGGGTCTGATTCAAAACCTTCAATCGGTTGATCTTTCTAATAATTCCTTTAATGGGTCTCTTCCCTTGTCTCTGTTTAACGCTACCATGCTCCGGTTTCTTGATTTGTCGGAGAATTTGATCTCCGGTGAGGTTCCGGCGGCGGTGGGTGGACTTGGGAATCTGCAAGTTCTTAACCTCTCTGGTAATGCTTTGGTCGGGAAGTTTCCGGGTGATCTTGCGGATTTGGGTAATCTTACGGTTCTGTCTCTGAAGAACAATTACATTTCCGGTGAAATTCTCGGTGGGTTTAAGACGGTGGAGGTTTTGGATCTGTCTTCTAATTTGATTGATGGAGCTTTGCCGTCTGATTTTGGTGGCGACAATTTACGTTATTTCAACATCTCGTACAATAAACTTTCCGGCAAAATCCCGCCGGATTTCGCTCATAATATTCCGGCCAACGCCACTATTGATCTCTCCTTCAATAACCTCACCGGAGAAGTCCCTGTTTCCGATGTGTTCATGAACCAAGAAGCAAAATCCTTCACCGGGAATCGCCAGCTCTGCGGCGAGTTAACGACAACCCCATGTTCAATTCCTTCTTCGGCGGCGTCTCTCCCGCCGGCGATCGCTGCCATTCCACTAGACCGAAGTACTCCAGAAACGACATCGCCGGAAAAACAGAGCGAAACTCGGTTCAAACCCTCAACAATCGTCGCCATTGTACTCGGAGACATCGTCGGATTGGCAATTCTGTTCCTCCTCTTCTTCTACGTCTATCACTTGAAGAAAAGAAACAAATCCGTCGAAACCCATTTGAAAAACGAAGCCAATTTGGCCAAGGAGAGCTTCTCCACATCCTCATCGGAATCCAGAGGAGTTTCCCGATGGTCCTGTTTAAGAAAAACAGAGGACCCAGAAGAGGGAAACTCCGATCAGGCAAGTGCCGTGTCAATCCCCGGCCACCGTGAGACGGCTGAAGAGGGAGGAGACGGAAACAGAAAGGGGACTTTGGTGACGGTAAACGGCGGAGAGAAGGAGCTGGAACTGGAGGCGCTGCTGAAAGCATCAGCGTACATCCTCGGCGCCACCGGATCAAGCATAACATACAAAGCAGTACTGGAAAACGGGACGGCGTTTGCCGTGAGAAGAATCGGAGACGGCGGAGTGGAAAAATTCAAAGATTTCGAGAATCAAATTCGTGTCGTAGCTAAATTGGTTCATCCAAATTTGGTTCGTGTTCGTGGGTTTTATTGGGGCATCGATGAAAAGCTCATAATTTATGATTTTGTTCCTAATGGAAGCCTCGCCAATGCTCGTTACAGGAAAGTGGGTTCGTCGCCTTGTCATCTTCCATGGGAGCCTCGATTGAGAATAGCCAAAGGAGTAGCTCGTGGCCTTTCTTATCTCCATGACAAGAAGCATGTCCATGGCAACTTGAGGCCCACCAACATTCTTTTGGGTTTCGACATGGAGCCCAAGATCGGCGATTTCGGTCTCGAGAAGCTCTTCTTGGGCGACTCGAGTTACAAGCCCGGTGGCTCAACTCGAAATTTCGGAAGTAAACGGTCCACTGCATCTCGAGATAGCTTCCAAGATTTCGTTACTGGACCAAGTCCAAGCTCGATTAATGGAGTGTCGCCGTACTTGCCACCAGAGTCGCTTCGGAGCTTGAAGCCCAACCCAAAGTGGGATGTGTACTCTTTTGGAGTGATATTGCTTGAGCTATTGACAGGGAAGATCATCGTGTTGGATGAGTTGAGCCAGGTGCTTGGACTTGCCGTCGAAGATAAGAGTCGAGCCCTGAAAATGACTGACATGGCGATTCGAGGTGAGATGGAGGGGAAAGAAGAAGCTTTGTTGTCTTGCTTTAAATTAGGATATAGTTGTGCATCACCTAACCCACAAAAGAGACCATCCATGAAGGAATGCTTGCAAGTTTTGGAGAAATTTCCAACCATATCCACTTCATCACACTATTATGGTCTCTAA 2271 47.78 MICHWSCHWSFRVLAFLLLLLLLRLQSSCYGLNFDGVLLLSFKYGVLDDPLFVLQNWNYSDETPCSWRGVQCSDGGGAGSRVTGLSLPNSQLMGSVSSDLGLIQNLQSVDLSNNSFNGSLPLSLFNATMLRFLDLSENLISGEVPAAVGGLGNLQVLNLSGNALVGKFPGDLADLGNLTVLSLKNNYISGEILGGFKTVEVLDLSSNLIDGALPSDFGGDNLRYFNISYNKLSGKIPPDFAHNIPANATIDLSFNNLTGEVPVSDVFMNQEAKSFTGNRQLCGELTTTPCSIPSSAASLPPAIAAIPLDRSTPETTSPEKQSETRFKPSTIVAIVLGDIVGLAILFLLFFYVYHLKKRNKSVETHLKNEANLAKESFSTSSSESRGVSRWSCLRKTEDPEEGNSDQASAVSIPGHRETAEEGGDGNRKGTLVTVNGGEKELELEALLKASAYILGATGSSITYKAVLENGTAFAVRRIGDGGVEKFKDFENQIRVVAKLVHPNLVRVRGFYWGIDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEPRLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLEKLFLGDSSYKPGGSTRNFGSKRSTASRDSFQDFVTGPSPSSINGVSPYLPPESLRSLKPNPKWDVYSFGVILLELLTGKIIVLDELSQVLGLAVEDKSRALKMTDMAIRGEMEGKEEALLSCFKLGYSCASPNPQKRPSMKECLQVLEKFPTISTSSHYYGL 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3510721 3513597 + Cp4.1LG16g01490.1 Cpe16g00149 482524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00149 756 Gene3D Transferase(Phosphotransferase) domain 1 524 752 - -
Cpe16g00149 756 Gene3D Phosphorylase Kinase; domain 1 427 523 - -
Cpe16g00149 756 Pfam Protein kinase domain 454 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00149 756 ProSiteProfiles Protein kinase domain profile. 448 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00149 756 PANTHER BNAC07G16060D PROTEIN 18 746 - -
Cpe16g00149 756 CDD STKc_IRAK 454 744 - -
Cpe16g00149 756 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Cpe16g00149 756 SUPERFAMILY Protein kinase-like (PK-like) 453 742 IPR011009 -
Cpe16g00149 756 Gene3D Ribonuclease Inhibitor 194 292 IPR032675 -
Cpe16g00149 756 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Cpe16g00149 756 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 746 - -
Cpe16g00149 756 MobiDBLite consensus disorder prediction 396 430 - -
Cpe16g00149 756 Pfam Leucine rich repeat 147 188 IPR001611 GO:0005515
Cpe16g00149 756 Pfam Leucine Rich Repeat 221 242 IPR001611 GO:0005515
Cpe16g00149 756 SUPERFAMILY L domain-like 37 283 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01179 Cpe16g00149 CCT
Cpe05g01179 Cpe16g00149 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00425 Cpe-Chr1:2456344 Cpe16g00149 Cpe-Chr16:3510721 0 dispersed
Cpe14g00283 Cpe-Chr14:1648635 Cpe16g00149 Cpe-Chr16:3510721 0 dispersed
Cpe16g00149 Cpe-Chr16:3510721 Cpe05g01179 Cpe-Chr5:8132827 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62884 PF00069 Pkinase 9.00E-29 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00149 - - bhj:120088533 1259.97