Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00152 ATGGCGGTGGAGCTTCTCTCAGCCTGCACAAACACCCAACTCTCCGCCTCTATGGACCAAGACTCCGCCGTCCAAGAAGCCGCCACCGGCCTCCACACCCTCAAAAACCTCATCACATTACTCTCTCACTCTCATCCTTCAAATCTCGACTCCGATTGCCAAGCCGTCGCTAACTCCGCCGTCTCCCACTTCAAAAAGGCCATTTCTCTCCTCGGCCGCTCACCCAGAACTGGCCATGCTCGATTCCGTCGAGCCCCTTTGGATTCCTCTAAAATCTACAACGCCACACCCATTCAACAAATCCCTCCGCCCGTTGAGCGCCTCGAATCCGCCACCACCATCAATTTCTCGTACTCCTCTGCTCCAAATGGCTCGTTTTTGACCTCGATTCCTGGTGCCGACTCTGGAATTAGCCTCCAACACGAACCCTCTTCCTCTTCTTTTCAGATTACCGATCTTTCCAGAGCTTCTTCTGGTGTCAAGAGGAAGTGCGGGTCTGAGAATTTGGGCTCCGGGAAGTGCTCTGTATCCTCCGGTGGTCGTTGCCACTGCTCTAAGAAGAGAAAAATGAGGTTAAAAAGGGTGGTGAGAGTGCCAGCCATAAGCTCAAAGAACGCTGATATTCCTCCGGATGATTATTCATGGAGGAAGTATGGACAGAAGCCAATAAAGGGTTCTCCATATCCAAGAGGCTACTATAAGTGTAGCAGTTTAAGAGGATGTCCAGCAAGAAAGCACGTTGAGAGAGCCTCAGATGATCCAACTATGTTAATAGTGACATACGAAGGCGACCATAATCACTCACAATCTGTTGCAGAGGCCTCAAGTCTTATACTCGAATCTTGGTGA 849 50.41 MAVELLSACTNTQLSASMDQDSAVQEAATGLHTLKNLITLLSHSHPSNLDSDCQAVANSAVSHFKKAISLLGRSPRTGHARFRRAPLDSSKIYNATPIQQIPPPVERLESATTINFSYSSAPNGSFLTSIPGADSGISLQHEPSSSSFQITDLSRASSGVKRKCGSENLGSGKCSVSSGGRCHCSKKRKMRLKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPTMLIVTYEGDHNHSQSVAEASSLILESW 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3550772 3552888 + Cp4.1LG16g01500.1 Cpe16g00152 482527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00152 282 Pfam Plant zinc cluster domain 161 207 IPR018872 -
Cpe16g00152 282 ProSiteProfiles WRKY domain profile. 204 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe16g00152 282 SUPERFAMILY WRKY DNA-binding domain 205 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe16g00152 282 Gene3D WRKY domain 193 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe16g00152 282 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 104 281 - -
Cpe16g00152 282 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 17 92 - -
Cpe16g00152 282 SMART WRKY_cls 209 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe16g00152 282 Pfam WRKY DNA -binding domain 211 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe16g00152 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 104 281 IPR044810 GO:0003700
Cpe16g00152 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 92 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00175 Cpe-Chr6:949236 Cpe16g00152 Cpe-Chr16:3550772 2.63E-14 dispersed
Cpe06g00394 Cpe-Chr6:2231470 Cpe16g00152 Cpe-Chr16:3550772 1.02E-61 dispersed
Cpe16g00152 Cpe-Chr16:3550772 Cpe17g00877 Cpe-Chr17:6822550 8.94E-55 dispersed
Cpe16g00152 Cpe-Chr16:3550772 Cpe16g00153 Cpe-Chr16:3563077 0 tandem
Cpe10g00447 Cpe-Chr10:2618206 Cpe16g00152 Cpe-Chr16:3550772 4.69E-110 wgd
Cpe16g00152 Cpe-Chr16:3550772 Cpe19g00635 Cpe-Chr19:5145825 3.66E-08 wgd
Cpe16g00152 Cpe-Chr16:3550772 Cpe05g01181 Cpe-Chr5:8145093 1.09E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50682 PF03106 WRKY 3.30E-26 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00152 - - bhj:120089490 503.056