Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00301 ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTTCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAAAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTATAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACTCCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGAGAAGGGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAATTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAGATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAAGGCCGAGAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGAAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAATTGA 1269 53.27 MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPIMGNGFERRERGGGGGGFFDSQSSKADESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGRKSEGPKGRIGENGGGAHSDNWGRKFEGARGGFGENGGGADSDNWGKRSEGVRGGIGERPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIKDTVEKAERFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGEN 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4947554 4950020 + Cp4.1LG16g02980.1 Cpe16g00301 482676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00301 422 MobiDBLite consensus disorder prediction 382 397 - -
Cpe16g00301 422 MobiDBLite consensus disorder prediction 117 135 - -
Cpe16g00301 422 MobiDBLite consensus disorder prediction 19 337 - -
Cpe16g00301 422 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 259 406 IPR010433 GO:0003743
Cpe16g00301 422 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 244 IPR010433 GO:0003743
Cpe16g00301 422 MobiDBLite consensus disorder prediction 188 208 - -
Cpe16g00301 422 MobiDBLite consensus disorder prediction 136 162 - -
Cpe16g00301 422 MobiDBLite consensus disorder prediction 19 34 - -
Cpe16g00301 422 MobiDBLite consensus disorder prediction 369 422 - -
Cpe16g00301 422 Pfam Plant specific eukaryotic initiation factor 4B 244 378 IPR010433 GO:0003743
Cpe16g00301 422 Pfam Plant specific eukaryotic initiation factor 4B 7 241 IPR010433 GO:0003743
Cpe16g00301 422 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 259 406 - -
Cpe16g00301 422 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 244 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00580 Cpe16g00301 CCT
Cpe05g01315 Cpe16g00301 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00029 Cpe-Chr7:153899 Cpe16g00301 Cpe-Chr16:4947554 3.81E-06 dispersed
Cpe11g00037 Cpe-Chr11:182688 Cpe16g00301 Cpe-Chr16:4947554 1.15E-25 dispersed
Cpe16g00301 Cpe-Chr16:4947554 Cpe04g00580 Cpe-Chr4:6195809 4.91E-116 wgd
Cpe16g00301 Cpe-Chr16:4947554 Cpe05g01315 Cpe-Chr5:9243915 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00301 - - csv:101214573 607.06