Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00309 ATGGGGTCTTTGAAGCTGCCGCCTTCGACGACGGTGCTGAAATGGCTGGGATTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGCAACAATTACACCTTCTCCAACTACTCCGACGTCCTTAAGTCTCTGATGAATCTGACTCAACTTCAGCTCAATAATCTCTCCGTCGCGAAAGACGTCGGTAAAGCCTTTGGCTTACTCGCCGGAATCGCCTGTGATCGTTTCCCCACGTGGGTCATCTTGCTCATTGGATCTCTGGAAGGCCTTCTTGGCTATGGCGCTCAGTGGCTCGTCGTTAGCCAGAGGATTTCTCCTCTTCCTTATTGGCAGATGTGTATCTTCTTGTGTATGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGTTGGTGACCTGTATCAGAAACTTCCGGAAGAATCGCGGCCCTGTTTCCGGCATACTTAAAGGCTACGTTGGTCTCAGTACCGCGATTTTCACCGATCTCTGTACTGCTCTGTTTTCCGACGACCCTTCTTCCTTCCTCGTCATGCTCTCTGTTGTCCCCTTCGCTGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCGACAACCGCCGCCAAAGCCGCCGCCGACACCCAGGAGGAATCCAACTTCTTCGCCGTGTTCAACGCTCTAGCCGTCATCGTCGCCGTCTATCTCTTGTGCTTCGATTTCATAAAAAACATCGGCACGGTCGTCTCCCAATTGTTCTCCGTCGGGTTACTAATTCTCCTCGGATCCCCTTTGATCATTCCGATTTACTCGTTTTTCAAGAACTGCCACTTAAATTCAGCCCAATCGGACTTGGAGATTCAAACAGAGGAGCCCCTGTTGAAGGAAGAAGCCACCGTTGCCGCTCCGGTAAAGGAGGAAATAACAGAGGAGGAGCAGAGACAGCCAGTGATCGGAGAAGAACACACGATTATTCAGGCGGTGAAAACCATTGATTTCTGGGTATTGTTCATATCGTTCCTATGTGGAGTTGGGACCGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTAGCTCTGGGCTACGCCGATGTCTCCATGTTCGTCTCTCTCATAAGCATTTGGGGCTTTTTCGGCCGGATCCTCTCCGGTACCCTCTCCGAGCATTTCCTCAAGAAATTGGGCACACCAAGACCCTTATGGAATGCAGCATCTCAAATTCTAATGACAATTGGCTACATTTTGATGGCGATGGCAATGCCGGGGTCTCTCTACATCGGCTCAGTCGTAGTCGGGATCTGTTACGGTGTTCGTCTCTCAATCACCGTCCCCACAGCCTCGGAGCTCTTCGGGCTCAAATACTATGGTCTAATCTACAACATTTTGATCCTGAACCTCCCGATCGGGTCGTTCCTCTTCTCTGGGCTTCTCGCGGGATTCCTCTACGACATGGAGGCGACCCCGACGGAGGGCGGGGGGAACACGTGCATCGGCGGGCATTGCTATAGAATTGTGTTTGTTGTTATGGCGTTGGCCTGTGGGATTGGGTTGGTTTTGGACATTTGGTTGGCGTATAGGACCAAGGGGCTTTATTCTAAGCTGAAAGGGAACAAGAGATCAAAGAAGGGAAGCAGCAATAATAGCTCGTTGAGTTGA 1644 51.46 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDVLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSDDPSSFLVMLSVVPFAVCLFAMFFLREIPPPTTAAKAAADTQEESNFFAVFNALAVIVAVYLLCFDFIKNIGTVVSQLFSVGLLILLGSPLIIPIYSFFKNCHLNSAQSDLEIQTEEPLLKEEATVAAPVKEEITEEEQRQPVIGEEHTIIQAVKTIDFWVLFISFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLISIWGFFGRILSGTLSEHFLKKLGTPRPLWNAASQILMTIGYILMAMAMPGSLYIGSVVVGICYGVRLSITVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACGIGLVLDIWLAYRTKGLYSKLKGNKRSKKGSSNNSSLS 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4977055 4979205 - Cp4.1LG16g03080.1 Cpe16g00309 482684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00309 547 Gene3D MFS general substrate transporter like domains 10 206 IPR036259 -
Cpe16g00309 547 SUPERFAMILY MFS general substrate transporter 14 525 IPR036259 -
Cpe16g00309 547 CDD MFS_Mch1p_like 13 513 - -
Cpe16g00309 547 Gene3D MFS general substrate transporter like domains 324 545 IPR036259 -
Cpe16g00309 547 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 540 - -
Cpe16g00309 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 540 - -
Cpe16g00309 547 Pfam Nodulin-like 14 264 IPR010658 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00583 Cpe16g00309 CCT
Cpe05g01382 Cpe16g00309 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01132 Cpe-Chr2:10310946 Cpe16g00309 Cpe-Chr16:4977055 4.82E-85 dispersed
Cpe02g01631 Cpe-Chr2:13632331 Cpe16g00309 Cpe-Chr16:4977055 1.13E-90 dispersed
Cpe03g01155 Cpe-Chr3:9489385 Cpe16g00309 Cpe-Chr16:4977055 1.96E-110 dispersed
Cpe13g01125 Cpe-Chr13:8999898 Cpe16g00309 Cpe-Chr16:4977055 3.13E-93 dispersed
Cpe20g00903 Cpe-Chr20:8006873 Cpe16g00309 Cpe-Chr16:4977055 1.14E-83 dispersed
Cpe16g00309 Cpe-Chr16:4977055 Cpe04g00583 Cpe-Chr4:6224377 3.42E-165 wgd
Cpe16g00309 Cpe-Chr16:4977055 Cpe05g01382 Cpe-Chr5:9733765 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00309 - - cmos:111448555 981.474