Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00318 ATGATCCAAGATCTCCGTTCGAATCATAGGGCTCATAATCGTAAAGGCGAGCTTGAATCCTCAAATCCAGAAGTGTTTTCGAGTTCGAATGCCGTCGAGCTTCCGAACAGTTGCTCAATGGATACCTTCTTGGATGAAATTCTAAAGGACACTCATGCTTGCACACACGCTCATACTTGCAATCCTTCTGGTCCTGATTATTCACATACACACACCTGTTTTCATGTCCATACTAAAGTTGTCTCTTCCCCGACCGAAGACAAGGTTTCCACTGACGACACAGCGGAGTCTGTGGATAAGAAGACTAAGAAACGCTCGCTAGGTAACCGCGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCGAGGGCTGCATCATTGGAAGATGAAGTTATGAGATTGAAGGCCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGCCAGGCTGCATTGGAGGCTGAGATTTCTAGGCTTAAATGTTTGCTTGTGGATATTCGAGGAAGAATTGAAGGGGAGATTGGAAGCTTTCCATATCATAAACCAGCCAATTCAAATCTTCTCAATCAAAATGCACCTGGAAGTTATGTGATTAATCCATGTAATGTTCAATGCAACGATCAGCCGTATTGCCTTAATGCAGGGACCGATGGAAAAAGTGGAGAGAGCGTTTTGTTGAACGGGCATAGTTTTAGCGCGTGTGACATCGGAAATCTCGAGTGCTTGGCCAATCAAAACACAGGAGCAAAGGAACTTCCGGACTGTGAATTAAACCAGAAGAAAGATTTTTAA 789 44.11 MIQDLRSNHRAHNRKGELESSNPEVFSSSNAVELPNSCSMDTFLDEILKDTHACTHAHTCNPSGPDYSHTHTCFHVHTKVVSSPTEDKVSTDDTAESVDKKTKKRSLGNREAVRKYREKKKARAASLEDEVMRLKALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGSFPYHKPANSNLLNQNAPGSYVINPCNVQCNDQPYCLNAGTDGKSGESVLLNGHSFSACDIGNLECLANQNTGAKELPDCELNQKKDF 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5045606 5048982 + Cp4.1LG16g03230.1 Cpe16g00318 482693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00318 262 MobiDBLite consensus disorder prediction 81 110 - -
Cpe16g00318 262 SMART brlzneu 96 164 IPR004827 GO:0003700|GO:0006355
Cpe16g00318 262 Pfam Basic region leucine zipper 99 154 IPR004827 GO:0003700|GO:0006355
Cpe16g00318 262 Gene3D - 88 165 - -
Cpe16g00318 262 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 146 IPR004827 GO:0003700|GO:0006355
Cpe16g00318 262 PANTHER BASIC LEUCINE ZIPPER 23 16 249 - -
Cpe16g00318 262 Coils Coil 110 144 - -
Cpe16g00318 262 MobiDBLite consensus disorder prediction 1 19 - -
Cpe16g00318 262 CDD bZIP 109 156 - -
Cpe16g00318 262 MobiDBLite consensus disorder prediction 89 110 - -
Cpe16g00318 262 SUPERFAMILY Leucine zipper domain 101 146 IPR046347 GO:0003700|GO:0006355
Cpe16g00318 262 MobiDBLite consensus disorder prediction 1 29 - -
Cpe16g00318 262 PANTHER CCAAT/ENHANCER BINDING PROTEIN 16 249 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00591 Cpe16g00318 CCT
Cpe15g00593 Cpe16g00318 CCT
Cpe05g01371 Cpe16g00318 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00318 Cpe-Chr16:5045606 Cpe14g00539 Cpe-Chr14:3400297 2.81E-06 dispersed
Cpe15g00593 Cpe-Chr15:6688098 Cpe16g00318 Cpe-Chr16:5045606 1.69E-126 wgd
Cpe16g00318 Cpe-Chr16:5045606 Cpe04g00591 Cpe-Chr4:6254361 5.76E-123 wgd
Cpe16g00318 Cpe-Chr16:5045606 Cpe05g01371 Cpe-Chr5:9639800 2.53E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50699 PF07716 bZIP_2 2.40E-14 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00318 K25785 - cmax:111483945 489.189