Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00392 | ATGCCAAGTCCAGTGGACTGCAACTGTAATTTTCTATCTTATTTGCTCAATTTACTTATATTTTGGAACTCATTACAGATGCCAGATGAAAATTCAATTCCATTTGATCGAGATGCAGAGCCTTTTGTTGAGGTCGATCCAACTGGAAGGTTTGGACGATACAATGATCTTCTTGGGTCTGGAGCAGTGAAGAAAGTTTATAGAGCATTTGATCAGGAGGAAGGAATTGAGGTTGCTTGGAATCAGGTTCGATTGAGAAATTTTAGTGGGGATCCAATGTTCATTAACCGCTTGAGATCTGAGGTTCAGCTGCTGAGCACGTTAAACAACAAGTATATAATTGTTTGTTACAGTGTTTGGAATGATGATGAGCATAATACGTTGAATTTCATTACCGAGGTGTGCACATCAGGAAATCTGAGGGAATATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAGAAGTGGTCAAAACAGGTACTCGAGGGATTGGATTATCTTCATACTCACGAACCTTGCATTATTCACAGGGACCTCAACTGCAGTAACATATTTGTCAATGGTAACATTGGGCAGGTGCAATGTCAACTTTCCTTCCGTGGAGATTATAAGAAATGCCGATGA | 630 | 39.84 | MPSPVDCNCNFLSYLLNLLIFWNSLQMPDENSIPFDRDAEPFVEVDPTGRFGRYNDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDPMFINRLRSEVQLLSTLNNKYIIVCYSVWNDDEHNTLNFITEVCTSGNLREYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVQCQLSFRGDYKKCR | 209 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 5495339 | 5496157 | + | Cp4.1LG16g03830.1 | Cpe16g00392 | 482767 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00392 | 209 | Gene3D | Transferase(Phosphotransferase) domain 1 | 135 | 200 | - | - | |
Cpe16g00392 | 209 | SMART | serkin_6 | 52 | 209 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00392 | 209 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 27 | 196 | - | - | |
Cpe16g00392 | 209 | SUPERFAMILY | Protein kinase-like (PK-like) | 45 | 195 | IPR011009 | - | |
Cpe16g00392 | 209 | Gene3D | Phosphorylase Kinase; domain 1 | 36 | 133 | - | - | |
Cpe16g00392 | 209 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED | 27 | 196 | - | - | |
Cpe16g00392 | 209 | Pfam | Protein kinase domain | 56 | 191 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00392 | 209 | ProSiteProfiles | Protein kinase domain profile. | 52 | 209 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00678 | Cpe16g00392 | CCT | |
Cpe04g00678 | Cpe16g00392 | ECH | |
Cpe05g01401 | Cpe16g00392 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe14g00766 | Cpe-Chr14:6028325 | Cpe16g00392 | Cpe-Chr16:5495339 | 2.61E-91 | dispersed | |
Cpe16g00392 | Cpe-Chr16:5495339 | Cpe09g01001 | Cpe-Chr9:8877785 | 4.56E-67 | dispersed | |
Cpe16g00392 | Cpe-Chr16:5495339 | Cpe05g01401 | Cpe-Chr5:9854058 | 7.97E-120 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62890 | PF00069 | Pkinase | 1.20E-24 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00392 | K08867 | - | csv:101222153 | 347.051 |