Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00412 ATGCCGAAGGGTTTGAAGAGTAAATGTCATTCTACGTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAATCGTGTTAATGATCTTCAAGGGATATTCACTAATCTTCAAAATGCACGAAAGGAGAGTCGTACTACTGATATCGCTGTCTTGGAGGAGCAAGTCCATCAAATGCTTAGGGAGTGGAATGCTGAGCTTAATGAACCATCGCCTTCCTCTTCATTTGTTGAGGGTAGTCTTGGATCGTTCTCGCAAGAACTAGCCCGTCTTCTTGAGCATTGTGATGAGCAAGATGATGCAACTAGTACAATGGCTGAACCAAAGACTGAGCCTGAACTCCATTGCGTTCTTGCCAGCAAACCGTCAAATTTTGTTCAGGATAGTTTTGGTTTTCCGGAGCTCCAACAGCATAGTTTTCTAGGATTTGAAGAGTGCCAAGTCTCTTCTCCAGTTCTACAGAATTATTCATTTTACAAATCTGACATGGCTACTCAGCCTAATTGTCAAAGTTTCGAAGTAGATAAAAACTTTGAGCAGAACACAGTAGTCAGTAAGGATGATGTGTCTACTTTGGATTGCCATGCATTGAATTCACACCAAGAGTTCGACTATGGGGTTCTTGTTGGGCCATATGATGCGGGAGACTTTAGTCAGGACACAAAGTCCGGTATTCTCCCAACTATCTCACCCCCACCGTCTGCTTTTATGGGCCCGATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCCAAATGGTGCCTGGACTATTGCAGTAGTTGTCATTCTGTTCTTGCAATAAATGAAGGCCTTCCAGGAATGACTCCAATATTGCGCCCTGGAGGCATTGGCTTAAAGGATGGTCCATTGTTTGCTGCTCTTCGTGCAAAGACACGGACCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGGAAATCCCCATGGAATGCTCCTGAGCTTTTTGATATTTCGTTTCTTGAGGGGGAGACAATCAGGGAATGGCTCTACTTCGACAAGCCTAGACGGGCCTTTGAGAGTGGCAATCGAAAGCAAAGGTCATTGCCAGATTACAATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAGTTCGGTGGTCAGAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCTCTCTTGAATGGCATTTGTACGAATACGATATCACAGATTATGATTCATTCGCATTATATAGGCTGGAACTCAAGCATGCTGATGCAAAGAAGAGTCCAAAGGGAAAACTGACAGCTGATCCTCTGGCTGATCTGCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGGCCTGTTGAGCTTGGACAACTTATTAAAGCTAAGAGTACGAGTACAACGATGGCGAATAATAAGGCTGATAATGGTTACAGTCAGTTTCAGTTCAATGTGTCTGCTTTATGTTAA 1455 44.05 MPKGLKSKCHSTSHQLLKEKAKNRVNDLQGIFTNLQNARKESRTTDIAVLEEQVHQMLREWNAELNEPSPSSSFVEGSLGSFSQELARLLEHCDEQDDATSTMAEPKTEPELHCVLASKPSNFVQDSFGFPELQQHSFLGFEECQVSSPVLQNYSFYKSDMATQPNCQSFEVDKNFEQNTVVSKDDVSTLDCHALNSHQEFDYGVLVGPYDAGDFSQDTKSGILPTISPPPSAFMGPICALWDCFRPAQGSKWCLDYCSSCHSVLAINEGLPGMTPILRPGGIGLKDGPLFAALRAKTRTKEVGIPICDGAATRKSPWNAPELFDISFLEGETIREWLYFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGQKKSYYMDPQPSSSLEWHLYEYDITDYDSFALYRLELKHADAKKSPKGKLTADPLADLQKKMGRLTAEGPVELGQLIKAKSTSTTMANNKADNGYSQFQFNVSALC 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5578409 5581117 + Cp4.1LG16g04010.1 Cpe16g00412 482787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00412 484 PANTHER TRANSCRIPTION FACTOR VOZ1 1 463 IPR039277 GO:0006355|GO:0048578
Cpe16g00412 484 Coils Coil 18 38 - -
Cpe16g00412 484 PANTHER TRANSCRIPTION FACTOR VOZ2 1 463 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01419 Cpe16g00412 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00412 Cpe-Chr16:5578409 Cpe19g01043 Cpe-Chr19:7214459 2.21E-177 dispersed
Cpe10g00166 Cpe-Chr10:993139 Cpe16g00412 Cpe-Chr16:5578409 6.25E-178 wgd
Cpe16g00412 Cpe-Chr16:5578409 Cpe05g01419 Cpe-Chr5:9943729 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50710 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00412 - - csv:101211467 838.95