Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00416 ATGCCAAATTTGCCTCCCAAATTCCCAAACTTCAACACTCCAAATCCCCCTGCACACGACGACTTCCTTTCCTTCTCGTCCCCTCGACAAAGTCTCCACCATCGGTCCGTTAGTGACTCGATCGCCTTCCTCGAAACGCCGACGATGAATCAAACCATTTTAGGCTCGGCTGCACCATCCAACAATAATGCATTTGATGCCTTTGATGAAGATGATCAGCCAACTTCTTCCGAGGCACATAACGATGGAATCACTGACTCGAAACGAGTCAAGAGAATCTTGGCAAACAGACAATCTGCACGAAGATCACGGGTGAGAAAGCTGCAATATATTACAGAACTGGAACAGAGTATCAGTACATTACAGGCCGAAGTTTCAATGTTGTCACCACAAGTAGCATTTCTAGATCAACAACGACTGCTTCTAAACGTGGACAATAGTGCTTTGAAGCAAAGAATTGCCTCCCTCTCCCAAGACAACATTTTCAAAGATGCCCATGAAGAAGCATTGAAGAGGGAAATAGAGAGATTAGGGCAATTATACCATCGGCAACAGAAGAATCGGAGAATGGATAGCAATGGGCCGTCGCCGGTAGCAGCCAACGAACCCATATCTCCGGGAGATAAAAACCAGAGGCTTCTCTATGTTTGA 651 45.93 MPNLPPKFPNFNTPNPPAHDDFLSFSSPRQSLHHRSVSDSIAFLETPTMNQTILGSAAPSNNNAFDAFDEDDQPTSSEAHNDGITDSKRVKRILANRQSARRSRVRKLQYITELEQSISTLQAEVSMLSPQVAFLDQQRLLLNVDNSALKQRIASLSQDNIFKDAHEEALKREIERLGQLYHRQQKNRRMDSNGPSPVAANEPISPGDKNQRLLYV 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5592361 5593656 + Cp4.1LG16g04040.1 Cpe16g00416 482791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00416 216 PANTHER BASIC LEUCINE ZIPPER 34 72 193 - -
Cpe16g00416 216 PANTHER BASIC LEUCINE ZIPPER 34 14 76 - -
Cpe16g00416 216 MobiDBLite consensus disorder prediction 53 85 - -
Cpe16g00416 216 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Cpe16g00416 216 MobiDBLite consensus disorder prediction 184 216 - -
Cpe16g00416 216 Gene3D - 87 158 - -
Cpe16g00416 216 MobiDBLite consensus disorder prediction 53 70 - -
Cpe16g00416 216 Coils Coil 167 187 - -
Cpe16g00416 216 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Cpe16g00416 216 SUPERFAMILY Leucine zipper domain 88 142 IPR046347 GO:0003700|GO:0006355
Cpe16g00416 216 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 138 IPR004827 GO:0003700|GO:0006355
Cpe16g00416 216 CDD bZIP_plant_RF2 89 139 IPR044759 GO:0003700|GO:0006355
Cpe16g00416 216 Pfam bZIP transcription factor 88 132 IPR004827 GO:0003700|GO:0006355
Cpe16g00416 216 PANTHER BASIC LEUCINE ZIPPER 34 14 76 - -
Cpe16g00416 216 PANTHER BASIC LEUCINE ZIPPER 34 72 193 - -
Cpe16g00416 216 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00711 Cpe16g00416 CCT
Cpe15g00729 Cpe16g00416 CCT
Cpe15g00729 Cpe16g00416 ECH
Cpe04g00711 Cpe16g00416 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00416 Cpe-Chr16:5592361 Cpe04g00094 Cpe-Chr4:857097 1.97E-19 dispersed
Cpe15g00729 Cpe-Chr15:7664302 Cpe16g00416 Cpe-Chr16:5592361 2.11E-65 wgd
Cpe16g00416 Cpe-Chr16:5592361 Cpe04g00711 Cpe-Chr4:7042919 1.73E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50711 PF00170 bZIP_1 1.00E-09 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00416 - - csv:105434687 257.299