Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00458 ATGATCGATAATACGGATGGGATAGCGATTCAGAGAGAAATGGAATTGAGAAGAGGCGGTTATGTGGGTGGTTTAGTGATTCTCCTCTGTGCATTGGCAATTGTGAGCTCAGAGGGCAGGAGGAAGACGTTAGAAATGGTTATCGCCAATGCCGCCGATTGCCATTTCACATCCTCAGAGTTGGAAGGAGCTATGGGCGAGAAGGCATGCACGAAACAATTTGTTCCTTGCATCCAGAAAGAAACCATGGATAAATCTATAGCAATTCTACCTCCTGAAATGAAACATGGCTTGTTGGATTGTTTAAGAAAGAGAAGTATGTTTTCTCGTGATTTATCTGATTCGGTTAGGAGATCAATTGAGTTCATTTTCGTAGAGTCCAATATTCACATGAGACAATTAATTAGATTGTTTCAAGGTTCATCACCACCGCACCCTACTGCAGCTCCAGCTCCATCTCCTGTTGCAGAATCACCGGCTAATTCTCCATTACTGTCTCCCATTCATGCTCCAATGTCGTCGCCGAGTAATGCACCAACCAATTCTCCTCCTGTCGTGGCCCCGGCCCCGTTGCCAGAACTGCTACCGCCAGTGGGCGACACTGATGTTTTGGATTCACCTCCATCTACTGTAGCTGGCTCACCACCTCTTCCACGAGCTTCTCCCAAGTCTCGCCCTCTAAAGAAGCATGAAGAAAGCCAGATGGGCATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTGTTCTTGTGGTTGCGCTGGTTTTGTTCTGCTGTCGTAGAGGTAAGGGAAGTAAGGTTGAGCCGAAGGATGGGCAAAAGAATGAGAAGCCTTTAAACAACATATCTTTGAGTGAATTACCAGCAGGTTCTTCACTGAAGGCATACAGTGTTGGAAATCCAGCAGCCAAAGAGTTCAACGCTAATAATGGAACTAAACCACCACCCTCTTTTGTTGGCAACTTAGCAGTGGATCCTGAAAACCATACCTATATGGCTGAGGGTCCAACATCTGATGGTAAATCATCAGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGACCAGATGCTCAGCCTCCTCCTCCAACAGCACCTGCTGTGGCACCTCCACCCCCTCCGCCTGCACCCAGAGCTCCACCACCATCACCCCCGAAAGTTTCTCGGCCCCCACCTGCACCACCGGCAGCAATCCCTGGTAAACCTCAAGCACCACCGATGGCGCCACGTAAGGGTGGACCTAGTGGCTCAAGTATGGATCCTGATGCAGTAGGCCATAAAACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTTGCCAACCCTGGACATTCCATGGTCTGGCACGAGATTAGTGATGGATCATTCCAATTCAATGAGGAGATGATGGAGTCCTTGTTTGGATATGCAGCAGTGGAAGCTAACAAAGGCAACCGCAAGAAAGATTTAGCTTCGGAACCTTCAGTACAGTACATTCAAATCATCGACCCTAGGAAAGCTCAAAACCTTTCAATTCTCCTACGGGCACTGAATGTGACAACAGAAGAAGTTGTGGATGCCATTCAACAAGGCAATCTCTCTGTTCTTAGAATAAAATCTACAATCGGTTCAATTCATGAAACTAACAGAGGGTTTATAACAAATTATGTACCAGGAAATCCTGATCTTCCAGCAGAGCTCATGCAGACCTTGTTGAAGATGGCACCAACAGCAGAAGAGGAGCTGAAACTGAGATTATATTCAGGGGACCTTTCTCAGCTAGGTCCAGCAGAACGGTTCCTGAAAGTGTTGGTGGACGTTCCTTTTGCTTTTAAACGATTGGAGTGCCTTCTGTTCATGCTCTCATTGAGGGAAGACGTCGCTAGCATTAAAGAGGCATTCGCTACGCTACAGGCAAGTATTTTCAAATCCAAAATCAAACACAATCGCTTTATGAAACACAGCATGCTATTTTTCAAGCTACTAGAAGCAGTTCTCAAAACTGGCAATCGTATGAATGTCGGGACGTACCGTGGCGGTGCTCAGGCGTTCAAGCTCGATACGCTCTTGAAACTGGCGGATGTTAAGGGAACCGACGGCAAAACTTCGCTCTTACACTTTGTCGTACAGGAGATTATTCGTTCGGAGGGCAGTCGAGCAGCCCGCTCTAATAGACGTAGCCGGAGTTCGTCCAGTATAGTTTCCAACGATACGGTTTCCGAAGACGTCGTCGACGGTTCTGTGGAACATCATCGGCGATTAGGTCTTCAGGTCGTTTCTGGTTTGATCACGGAGCTCCAGGACGTTAAAAAAGCGGCCGCCATAGATGCGGAAGGGCTAACGAGGACGATCTCGAAACTCGGCCAGTCTCTGCTTAGAACCAAAGGATTTATAAACGCGGAGATGGAAAGTTTGGACGAAGACAGCAAATTCCACCAATCGGTGTCGAAATTTGTGGAAGGAGCAGAAGCGGACATTTCGTGGATTGCAGGGGAAGAAAAGAGGATCATGGCACTGGTGAAGAGAACGGTGGATTACTTCCATGGAAATTCCGGAAAGGACGAAGGATTGCGACTGTTCACGATCGTACGCGATTTCCTAATTGTGTTAGACAAGACCTGTCAACAGGTCGAAGAAGAAGCTGCAGCTGCGGCAAAGCAAGCAAAGAATTCCAAAAAAGAAACTCCAACATCGTCGCAGCAGAATTCAGATCTACAGCAGCGGCTATTTCCAGCGATTGCAGAACGCCGGGTGGGCGAGGACTCAAGTTCTTCGGACGTCGACGACGACGACGATGGCAAGAGTTCATCATCATCAGCAGCAGATTAG 2805 47.74 MIDNTDGIAIQREMELRRGGYVGGLVILLCALAIVSSEGRRKTLEMVIANAADCHFTSSELEGAMGEKACTKQFVPCIQKETMDKSIAILPPEMKHGLLDCLRKRSMFSRDLSDSVRRSIEFIFVESNIHMRQLIRLFQGSSPPHPTAAPAPSPVAESPANSPLLSPIHAPMSSPSNAPTNSPPVVAPAPLPELLPPVGDTDVLDSPPSTVAGSPPLPRASPKSRPLKKHEESQMGIIAGIVAAGVGVVLVVALVLFCCRRGKGSKVEPKDGQKNEKPLNNISLSELPAGSSLKAYSVGNPAAKEFNANNGTKPPPSFVGNLAVDPENHTYMAEGPTSDGKSSAMPPLKPPPGRPDAQPPPPTAPAVAPPPPPPAPRAPPPSPPKVSRPPPAPPAAIPGKPQAPPMAPRKGGPSGSSMDPDAVGHKTKLKPFFWDKVLANPGHSMVWHEISDGSFQFNEEMMESLFGYAAVEANKGNRKKDLASEPSVQYIQIIDPRKAQNLSILLRALNVTTEEVVDAIQQGNLSVLRIKSTIGSIHETNRGFITNYVPGNPDLPAELMQTLLKMAPTAEEELKLRLYSGDLSQLGPAERFLKVLVDVPFAFKRLECLLFMLSLREDVASIKEAFATLQASIFKSKIKHNRFMKHSMLFFKLLEAVLKTGNRMNVGTYRGGAQAFKLDTLLKLADVKGTDGKTSLLHFVVQEIIRSEGSRAARSNRRSRSSSSIVSNDTVSEDVVDGSVEHHRRLGLQVVSGLITELQDVKKAAAIDAEGLTRTISKLGQSLLRTKGFINAEMESLDEDSKFHQSVSKFVEGAEADISWIAGEEKRIMALVKRTVDYFHGNSGKDEGLRLFTIVRDFLIVLDKTCQQVEEEAAAAAKQAKNSKKETPTSSQQNSDLQQRLFPAIAERRVGEDSSSSDVDDDDDGKSSSSSAAD 934
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5795573 5798890 + Cp4.1LG16g04460.1 Cpe16g00458 482833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00458 934 MobiDBLite consensus disorder prediction 264 284 - -
Cpe16g00458 934 Coils Coil 866 886 - -
Cpe16g00458 934 MobiDBLite consensus disorder prediction 345 408 - -
Cpe16g00458 934 SMART it6_source 419 877 IPR015425 -
Cpe16g00458 934 MobiDBLite consensus disorder prediction 328 424 - -
Cpe16g00458 934 MobiDBLite consensus disorder prediction 882 900 - -
Cpe16g00458 934 Gene3D Formin, FH2 domain 433 901 IPR042201 -
Cpe16g00458 934 MobiDBLite consensus disorder prediction 877 934 - -
Cpe16g00458 934 PANTHER FORMIN-RELATED 551 920 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe16g00458 934 PANTHER FORMIN-RELATED 16 524 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe16g00458 934 PANTHER FORMIN-LIKE PROTEIN 3 551 920 - -
Cpe16g00458 934 PANTHER FORMIN-LIKE PROTEIN 3 16 524 - -
Cpe16g00458 934 MobiDBLite consensus disorder prediction 177 195 - -
Cpe16g00458 934 ProSiteProfiles Formin homology-2 (FH2) domain profile. 419 888 IPR015425 -
Cpe16g00458 934 MobiDBLite consensus disorder prediction 140 229 - -
Cpe16g00458 934 MobiDBLite consensus disorder prediction 911 928 - -
Cpe16g00458 934 SUPERFAMILY Formin homology 2 domain (FH2 domain) 369 879 - -
Cpe16g00458 934 Pfam Formin Homology 2 Domain 425 861 IPR015425 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01457 Cpe16g00458 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00746 Cpe-Chr2:4745471 Cpe16g00458 Cpe-Chr16:5795573 1.69E-168 dispersed
Cpe06g00740 Cpe-Chr6:4645922 Cpe16g00458 Cpe-Chr16:5795573 4.00E-168 dispersed
Cpe16g00458 Cpe-Chr16:5795573 Cpe18g00055 Cpe-Chr18:1095180 7.32E-93 dispersed
Cpe16g00458 Cpe-Chr16:5795573 Cpe05g01457 Cpe-Chr5:10140518 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00458 - - cmos:111449007 1327.77