Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00498 ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGACGACATTCACGAGTATAGGCATGTGGTGCTCCCACCCGACGTGGCAAAGTTGCTGCCTAAGAATCGCCTGCTCTCTGAAAATGAGTGGCGTGCACTTGGAGTTCAGCAGAGTCGTGGATGGGTGCACTATGCTATTCATCGTCCCGAGCCACATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAACCTCGCTCAACAAAACGTGCTTGCTGCTAAATGA 270 51.11 MGQIQYSEKYFDDIHEYRHVVLPPDVAKLLPKNRLLSENEWRALGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 6045725 6051806 + Cp4.1LG16g05020.1 Cpe16g00498 482873
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00498 89 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Cpe16g00498 89 SUPERFAMILY Cell cycle regulatory proteins 1 83 IPR036858 GO:0016538
Cpe16g00498 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Cpe16g00498 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Cpe16g00498 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Cpe16g00498 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Cpe16g00498 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 86 - -
Cpe16g00498 89 Gene3D - 1 83 IPR036858 GO:0016538
Cpe16g00498 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 86 - -
Cpe16g00498 89 SMART CKS_2 3 72 IPR000789 GO:0016538
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe16g00498 Cpe20g00722 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00396 Cpe-Chr5:2243788 Cpe16g00498 Cpe-Chr16:6045725 2.76E-61 dispersed
Cpe16g00498 Cpe-Chr16:6045725 Cpe20g00722 Cpe-Chr20:6140620 3.45E-50 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00498 K02219 - egr:104421234 167.548